Pseudomonas aeruginosa C40, Q087_00429
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTGGTGGCTTTCCAGGCCCAGCCGGTGCAAGGCGTTCGCGGTCTGGGTGACGCGGGCGAACAGCTCGGCATAGCTGATCCGCAACGGTTCTTCGGC GGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCGCTGGGCCGAGCGTTGCAACAGTTCGTAGGTGCTGGACGGCAGGTCGCGCTGT TCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGACGATCGATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGCGGAC ACTCGCCGGATCGCTCCGGCACCGTCCCGAAGATGCCACCCCCGTCGTCGCCCTACCGTTGTCTTTTTGTAGCGCGCCGCCGGTCGCGCGCACGAGTCCT CCCGAAGGCTGCCCCGGGCGCTTCGCGCAGCCCCCTCCAGGCCCCGTCCGGCCAGGGCTGGAGGGCGCCGGCCAAGCATGGATTTCTCCCCGCTGGCAAC
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| DNA Sequence for Gene |
>Q087_00429
ATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCCGTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGC AGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGAAAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACC GCGCCCCCCGCGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGCTGAAAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGCCAAAGAAGGCCGG GACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAACCGAAGCCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCA AGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCATCCATGACCTCGGCTTCCCCTACTGCACCCCGATCCAGGCGCAGGTACTGGG CTTCACCCTGCGCGGCCAGGACGCTATCGGCCGCGCCCAGACCGGCACCGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAGTTGCTGCAGACC CCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATCGCCCCGACCCGCGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGA CCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACTTCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGC CACCCCAGGCCGTCTGCTGGACTTCAACCAGCGCGGCGAGGTGCACCTGGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATG GGCTTCATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAGGGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGA ACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGCCGGAGAACGTCGCCAGCGACACCGTCGAGCAGCATGTCTACGCCGTGGCCGG CAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCACAGAACAACTGGGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAG GAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGACGTGCCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAGA TCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCGACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAAGACCCGGACGACTA CGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGCACCTCGATCAGCTTCGCCGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAA CTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTCAAGCCGGTACCGCGCAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGGCGTGGAGAAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCGGGTCGGCGCT TGCCCGACAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAA GCCGAGCAACTACTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGG TGGAGTTCCCCGCCGGTCGCGGCGACTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGGGTCAAGACTTCGCCCTACATCGTCCGCGA ACAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACC
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| Amino Acid Sequence |
>RNA helicase
MLYTGARSFLNHYEIAVLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRPPRADNESGAPRAAEKAEKGEKPAKPAAKEGR DAKPRSDKPRRERKPKPVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQT PPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDM GFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIE ERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEE LLGRKITCEMPPAELLKPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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