Pseudomonas aeruginosa PAO1, PA0884
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACCTCGATCTCAACAGCGGCAGCAACGCAGCCGAACAGATTCTCGGTCACGCCCGTTACGCACTGCTCCTGCAAACGCGCCTGGCAGGCCTGGCGCCGC CGCTGGACGGCGTCTATCCGGCGATCCAGAACCGTGCCGGACTGGTCGAGGCAGTGCGCTTCGCTCGCGACATGGGCTTCGGCGGGTTGCTGTGCATCCA TCCGAGCCAGGTCGAGCCGATCCACCAGACATTGATGCCGAGTCCCGCGGAACTGGAGTGGGCGCGTCGGGTGGCAGAGGCCGGCGCCTCCGGTGCCGGC GTCTTCGTGGTCGACGGCGAGATGGTCGACGCGCCGGTGCTGGGGCGCGCGCGACGCCTGCTGGAGCGGGCCGGGGAGGGTGGCTGAACGCGTTCGACAG ACGCGAACGCGGGCTTGAGCAATGGCGAATTCTCCGAACGCGCCGGCTGCGTCAGGCTCGTCGATACCTCGAAAGCACAACAACAATCTGAGGTCACGAA
|
|
| DNA Sequence for Gene |
>PA0884
ATGTTCAAGACGATGGTACGGGCGCTGTTGTGCGCCCTGGCGATCGGTGGCTCCTGCCTGGCGAATGCCGCGCAGCCGATCGTCATCAAGTTCTCCCACG TGGTCGCGGAAAACACGCCCAAAGGCCAGGGCGCGCTGCTGTTCAAGAAACTCGTCGAACAGCGCCTGGGCGGCCGGGTCGAGGTAGACGTCTATCCCAA CTCGTCGCTGTTCGGCGACGGCAAGGAAATGGAGGCGCTGCTGCTGGGCGACGTGCAGATGCTGGCGCCGTCCCTGGCCAAGTTCGAGCAGTACACGCGC AAGGTGCAGATCTTCGACCTGCCGTTCCTCTTCGACGACATCCAGGCGGTCGACCGCTTCCAGCGCAGCCCGCAGGGGCGCGCCTTGCTGACCAGCATGC AGGGCAAGGGCATCCTCGGCCTGGCCTACTGGCACAACGGGATGAAGCAGCTCTCCGCCAATCGCCCGTTGCTGGAGCCGGAAGACGCGCGCGGGCTGAA ATTCCGCGTGCAGGCGTCCGACGTGCTCAACGAGCAGTTCCGCCAGCTCCGCGCGATCTCCCGGAAGATGTCCTTCGCCGAGGTCTACCAGGGCTTGCAG ACCGGCGTGGTGAATGGCACCGAGAACACCTGGTCGAACTACGAGAGCCAGAAGGTCAACGAGGTACAGAAGTATTTCACCGAGTCCAACCACGGCTTGG TGGACTACATGGTGATCACCAACGCGAAGTTCTGGAATGGCCTTCCGGCGGACATCCGCGAAGAACTGCAGCGGATCATGGACGAGGTCACCGTGCAGGT GAACCTCGAGGCCGAGCGCCTCAACCGCGACGCCCGCCAGCGCATCCTCGCCAGTGGCGCCAGCGAGATCCATACCCTGAGCCCGCAGCAGCGCGCCGAC TGGCGCCAGGCGATGCAGCCGGTATGGCAGAAATTCCGCGGCAATGTCGGTGCCGATCTGCTCCAGGCCGCCGAAGCTTCCAACCGTCCCGATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGTCCGGCCCCGCCCGGCCGGGCGGGGCATTGTGGAGAACGCTGCGATGAATCGACTCGTGCGCGTCTGGAACCGCTTCGAGGAGGGCGCTATCGCCT TCCTGCTGGCGGCGATGACGCTGGTGACCTTCCTCTATGTGGTGATGACCAACGTCTTCACCCTGTTCTACGACCTCGGCGACCGCCTGCCGACACTGCG GGCTCCGCTGTACTCGATGGGCGACGCGATCCTCGGGGTAGCCCAGGATATGTCCTGGAGCAACGCGCTGACCAAGGCGCTGTTCGGCTGGCTGATCTTC CTCGGCATCGCCTACGGCGTACGCACCGCCGGCCACCTCGGGGTGGATGCCCTGGTGCGCCTGGCGCCGCGTCCCTTGCAGCGCCTGATCGGGATACTCG CCTGCCTCTGCTGCCTGGGCTACGCCGGGCTGTTCATGGTTGCCAGCTACGACTGGGTGAAGACCCTGTTCGTCGCCGGCATCGGCGCCGAGGACCTCGA
|
|
| Amino Acid Sequence |
>probable C4-dicarboxylate-binding periplasmic protein
MFKTMVRALLCALAIGGSCLANAAQPIVIKFSHVVAENTPKGQGALLFKKLVEQRLGGRVEVDVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTR KVQIFDLPFLFDDIQAVDRFQRSPQGRALLTSMQGKGILGLAYWHNGMKQLSANRPLLEPEDARGLKFRVQASDVLNEQFRQLRAISRKMSFAEVYQGLQ TGVVNGTENTWSNYESQKVNEVQKYFTESNHGLVDYMVITNAKFWNGLPADIREELQRIMDEVTVQVNLEAERLNRDARQRILASGASEIHTLSPQQRAD WRQAMQPVWQKFRGNVGADLLQAAEASNRPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|