Pseudomonas aeruginosa C41, Q088_00885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa C41 genomic scaffold adgfh-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCGCCTTCGTACACATGACCAGCACTTCCGGGCTGATCGGCAACTTCGGCCAGGCCAATTATTCCGCGGCCAAGCTGGGCATCGTCGCCTTGAGCAA ATCCATCGCCCTCGACATGCAGCGCTACAACGTGCGTTCGAATTGCATCGCGCCGTTCGCCTGGAGCCGGATGACCGACTCGATCCCGGCCGCAACCCCG GAGCAGAAGGCCCGCGTCGACAAGCTGCAGCGCATGACCCCCGAGAAGAACGCGCCGCTGGCCGTCTACCTGGCGTCCGACGCCGCCCGCGAGGTCACCG GCCAGGTGTTCGCCGCGCGTCACCACGAACTCTTCCTGATGAGCCAGAGCCGGCCGCTGCGCAGTGTGCATAGCGAGCACGGCTGGACCCCGCAGAGCAT CGCCGAGCACGGCATGCCGGCGTTGCGCGGCAGCTTCATGGACCTGGCGCGCAGCCCGGACGTGTTCTCCTGGGACCCGATCTGACCGAGGAGGCATTCC
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| DNA Sequence for Gene |
>Q088_00885
ATGGGCGTGTTCAGGACCCGTTTCACCGAGACCTTCGGCGTCGAACACCCGATCATGCAGGGCGGCATGCAGTGGGTCGGCCGTGCCGAGATGGCTGCGG CGGTGGCCAACGCCGGTGGCCTGGCGACGCTGTCGGCGTTGACCCAGCCGAGCCCGGAGGCACTGGCTGCGGAGATTGCCCGCTGCCGCGAGCTGACCGA TCGGCCGTTCGGGGTCAACCTGACCTTGCTGCCGACGCAGAAGCCGGTGCCCTATGCCGAATATCGCGCAGCCATCATCGAGACGGGAATCCCCGTCGTC GAAACCGCCGGCAACGACCCCGGCGAGCACATCGCCGAATTCCGTCGACACGGCGTCAAGGTGATCCACAAGTGCACCGCCGTGCGCCATGCGCTCAAGG CCGAGCGACTGGGCGTGGACGCCGTCTCCATCGACGGCTTCGAGTGTGCCGGCCACCCGGGCGAGGACGACATCCCCGGCCTGGTGTTGCTGCCGGCCGC GGCCAACCGGCTACGCGTGCCGATCATCGCCTCCGGCGGTTTCGCCGATGGACGTGGCCTGGTCGCGGCGCTGGCGCTGGGCGCCGACGCGATCAACATG GGCACGCGCTTCCTGGCCACTCGCGAATGTCCGATACACCCTGCGGTGAAGGCGGCGATCCGTGCGGCCGACGAGCGTTCCACCGACCTGATCATGCGTT CCCTGCGCAATACCGCGCGGGTGGCGCGCAACGCGATCAGCCAGGAAGTACTGGCGATCGAGGCACGCGGCGGCGCCGGCTACGCCGATATCGCCGCGCT GGTCAGCGGCCAGCGCGGTCGCCAGGTGTACCAGCGGGGCGATACCGACCTGGGGATCTGGTCGGCCGGCATGGTCCAGGGCCTGATCGACGACGAACCG GCCTGCGCCGAGTTGCTCAGGGACATCGTCGAGCAGGCGCGCCAACTGGTGCGTCAACGCCTGGAGGGCATGCTCGCCGGGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGCTCCGCCACGGCGGTCGCGGCAGGGAGTGGCCGCGGCGCCGTGTCTATCCACTGACGACGAAGAGACAACAACAATGAAAATTCTTCCCGTTCCGA TGCTGGCCGCGGGGCTGGCGTTGCTGCCGTCGTTCGCCCAGGCGGAGTTTTTTGCCGACGGCAAGGCCGGCCTCGAACTGCGCAATTTCTATTTCAATCG CGACTATCGCCAGCCCGGCGCCAGCCAGTCCTATTCGGAGGAGTGGGCGCAGGGTTTCCTGTTGCGCTACGAGTCCGGCTACACTGAGGGGCTCTTCGGC CTGGGTGTCGATGCGCTGGGCCTGCTGGGTGTCAGGCTGGACTCCTCGCCAGAGCGATCCGGTAGCGGTCTGTTGCCGTATTCGACGAGCGACCGGCGCG CCGCCCACGACTATTCCAGCCTGGGCCTGACCGCCAAGCTACGGGTCTCGCACAGTACGCTGAAGATCGGCAGCCTGATGCCCAGGCTGCCGGTGGTGCA
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| Amino Acid Sequence |
>nitronate monooxygenase
MGVFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIETGIPVV ETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINM GTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQRGDTDLGIWSAGMVQGLIDDEP ACAELLRDIVEQARQLVRQRLEGMLAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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