Pseudomonas aeruginosa PAO1, PA0829
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGCTTCGGCGGGCTGCGCAGCGAGGCCGGCAGCGACGAGGACTGGTTGCGGGCGATGGTCTCGCTGTTCTTCGACTACCACCTGGCGGTCGGTCCGAT CATCCGCATGATGCAGGAGGAGGCCCTGCATGCCGGCTCGCCGCTGGCGGCGCACCGGCAGCGCGCGCACCTGAAGATCGTCGAGCTGTGGACCGAGCGC CTGGGCGCCCAGGGCGCGGCCCACGATGCGCTGACCTACCGGGTGCTGATCTGGGCGATGGAGGCGGCTTCGCTGGAGCTGCTCAATGCCAGCGACCCGC TGGAGCTGCCGCGGGTCAAGCGGGTGCTCGGCGACCTGCTGGTGGGTACGCTCTGTCCCCGCACCCAGGCTCCGACGAGATTGCAAGGGTAACAGCCGGG CAGTCGCCGCTCGCGCCTACAGAACCTAGGTTGGGCTCGCAGTCCGTCGTGGCCATGCTCTGATGCCCTGTCATAACAACAAGACGGGAGACGTGCGTCC
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| DNA Sequence for Gene |
>PA0829
ATGTCCGCGACACCCTATCTGCTGCAACCGCCGCTGGCGGTCGGATTCGCCCGCCTGGGCTTCGGCTCTCTCTCGCTGGAGTCGTTGCGCGAACGCTACG CCGCACCGTCCAGCGGCTCGCGCTTCATCGAGCTGGACGGTTTCCCGCTGCACTACCGCGACGAAGGCAGCCGCGACAAGCCGGTACTGGTGATGATCCA CGGCGTAGTGGCCTCGCTGCACACCTGGGACGACTGGGTGAAGGCGATGTCGCCGTACTTCCGCATCGTGCGCTTCGACGTACCGGGCTTCGGCCTGACC GGGCCGGGGCGTGACAGCCGTTACTCTGGCGAGCGCATGGTGGCGATCCTCGGCCAGTTGCTCGATTTCCTGAAGATCGACAAGGCCTCGATCGCCGGCA ACTCCCTGGGCGGCTATATCGCCTGGAACTTCGCCCTGGCGCAGCCGCAGCGGGTGGAGCGGCTGGTGCTGATCGACCCGGCCGGTTACCAGATGCGCAA GGTGCCGTGGATGATCGCCTCGGCGGCGCTGCCCGGCTCGACCCTGGTGATGCCGCTGTGGATGCCGCGAGCGCTGATCGCCCAGGGCATCAAGGAAGTC TATGGCGAGCCGGGGCGGATCAAGCCGGGGGTGGTCGACCGCTACTACGATCTGAGCCGCCGCCCGGGCAACCGCAAGGGCATGATGGAGATCTTCCGCG TGTTGCTGAAGGTCAACCGCGAGGAGCTCGGCACCTCCGGCGAACGCATCGCCCGGATCGTCGCGCCGACCCTGCTGATGTGGGGCGAACGCGACCGCTG GATCTCGCCGAAGCATGTACCGCTGTGGCAACGCGACCTGCCGGGGATCCAGGTGAAGACCTATCCGGGCGTCGGGCATATCCCCATGGAGGAGATTCCC GAGCAGACCGCGGCGGATGCACTGCGCTTCCTGATGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCAGGCCTTCATGAAGAAGCCCGCGCTGGTCAGTCGCGGGCTTTTTAATGCGTGGACGAAAGGCCGAAATACCAGGCAGGGCAGGGAAGCGATGCATG CCCCTCTCGCGGCGCGGAGGGGCGGCGAGGAGGGTCAGGCGGCCTTCGGTTCCGGTTCGAATTGGTCGCGGTACTGCTCGATGAGGTGCAGGTTATTGTG CTGCCAGGGGTGGAAGTCCTTCTTGTAGAAGTCCAGGTACACGCCCACCAGCGAGCGGAACACGCCGTCCTTGCCCCACAGCCACTTGATGCCGTCGCGC CAGACCTTGAAGTTCCACAGCAGGCCGTCGCGCTTGAGCATGTGGACCAGGCCCTTGGTGGTGTCGAGGGCGAAGAAGAAGGTGCCCTGGACCATCGCCC GGCGGCGCAGCCTGGCCTTGCCGTTGACCAGCATGAACACGTCGTAGGCCACCGCCTTGTGCTCGGTTTCCTCCAGTGCGTGCCAGCGCCACAGGCGGGC
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| Amino Acid Sequence |
>probable hydrolase
MSATPYLLQPPLAVGFARLGFGSLSLESLRERYAAPSSGSRFIELDGFPLHYRDEGSRDKPVLVMIHGVVASLHTWDDWVKAMSPYFRIVRFDVPGFGLT GPGRDSRYSGERMVAILGQLLDFLKIDKASIAGNSLGGYIAWNFALAQPQRVERLVLIDPAGYQMRKVPWMIASAALPGSTLVMPLWMPRALIAQGIKEV YGEPGRIKPGVVDRYYDLSRRPGNRKGMMEIFRVLLKVNREELGTSGERIARIVAPTLLMWGERDRWISPKHVPLWQRDLPGIQVKTYPGVGHIPMEEIP EQTAADALRFLMA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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