Pseudomonas aeruginosa C48, Q089_02656

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa C48 genomic scaffold adgeZ-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTATGCACCAATCGCTATCTGGCCGAGCGCCTGGGTGCCGGCACCGCGCTGGGCTTCGAACGGCCCGGGCCGGTCGCCGCCGCACGCCTGCGCAACGCGC CCAGCGCGCAGAGCCAGCCGCGCCTGGACGGCCAGTCGCGCTGGAGACTGGTCTCGCAGCTGACCCTCAACCACCTGTCGCTGGTGGAAGGCCCGCGCGC CCTCGAAGCCCTGCGGGAAATCCTAGCCCTGCACAACCTGCGCGACGATGCCAGCGCCCGCCGGCAGATAGAAGGGCTGAGGCAACTCGACTGCCAGCGG GTGGTGGCGCACGTCGGCGAGGATGCCTGGCGCGGCTGGCGCAATGGCCTGGAAATCCGCCTGCGACTCGATCCGCAACACTTCGTCGGCGCCAGCGGCG TGCTGTTCTCCGCCGTGCTGGCGCAGTTCTTCTCGCTGTATGCCACCGCCAACCGCTTCGTGCGCACGGTCCTGGTGGAAGCCGACAAGGAGGTGAAGAC
DNA Sequence for Gene
>Q089_02656
ATGGCAACCCCAGGCCGGCTCGCCGCTCTCCCTCTGAGTCAGCGGCTGCGCCGCACGCCGCAGCGCTTCGAACTGTTGCAGGCGCTGCTGCTGCTCGAAC GCGAGCGTCCCCAGGCGTTGCCGCTGGGCACCGGCAACGCGCCGCGGGCGGAGGCCCTGCGCCTGCGCGGGCCGCTGCTGCCGCTGTTCGCCTCGAGCGA GGTGGAAAGCCTGCTCGACGACCCGCAGCAACCGGTGCTGTCCACCCCGGTGTTCGGCCTCGGCGGCCCCGACGGCCCGTTGCCCTATGCCTACCAGGAA TGGCTGCAACAGCGTGCCCGGCAGAAGGACCATGCCCCCGCCGAGTTCCTCGACCTGTTCCAGCACCGCCTGCTCAGCCTGCTCTACCGGGTACTGCGCA AGCATCGCGTGGCGCTCGGTTTCGCGGTGCCGGCGGCGACCCCGGTGCAGGCGCAGCTACGCGCCCTCAGCGGCCTGTTGCCGAAAGCCCTGCAAGAGCG CCTGGCGCTGCCGGACAGCGCGGTACTGGCACGCACCGCGCTGTTCGCCGGCGGGCGTCGCTCCCTGGCCGGCTTCGCCGGCCTGGTGCGCCAGCATTTC GGCGTGGAGGCACGGCTGGACGCCTACCAGGGCGCCTGGAAGGAAATCCCCGCGGCCAGCCGCAGCCGGCTGCAACGCGGCGGACGCAACCTGCGCCTGG GTCGCGACGCCATAGCCGGCACGCGCACCTGGGACGAGCACGCCGGCATCGCCCTCAGTCTCGGTCCGCTGGATGCCCGCGAAGCCGCCCGCTTCTTCCC CGACGGCGACGCCCATGGCCAGTTGGCCAGCCTCGCCGCGCTGTACTTCGGCCCCGACCTGGATTGTCGCCTGAGCCTGCTGGTGAGCGGCGGCGCGCCG CTGCGCCTGGAGCGCGGTGCACCGCCCAGGCTGAGCTGGAACACCGGCCTGCGGCGCGTCGAAGACAGCCAGCGGCAGCGCATCGATCTCGACCTGCGGC AGCCGGAGGTAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATGGAACTCGCCGCCCTGATCGGCCGCCTCAACCCGGACTGTCGCCGCGCCCTGGAGCGCGCCGCGCAACGCTGCCTGCAACGCACCCATCATTACGTA GAGATCGAGCACCTGCTGCTGGAACTGCTGGACATCGACGGCGGCGACTTCGCCTGCCTGCTGCCGCGCTTCGGCCTGGAGCGCGACGCCCTGGTCGCCG AGATCAACCTGTCGCTGGAGCTGTTCAAGGCCGGCAATACCCGCACTCCGGCGCTGTCCGCGCACACCATCGGCCTGCTCGAAGACGCCGTGGTCCACGC CAGCGTGCTCGGCCAGGCGCAGATTCGTTCCGGCCTGCTGCTGCTCGCCCTGCTCGACCGCGAGGAGCGCCGCGCCCTGTTGCTGAACAGCGCGTCGTCG CTGCTGCGGATTCCCCACGAGGCCTTGCAGGCCAACCTGCTGGAGTGGATCCAGGCCTCCCGCGAACAGCCGCCCGCGCCGAACCGCCCGGCGGCAGGCG
Amino Acid Sequence
>type VI secretion protein
MATPGRLAALPLSQRLRRTPQRFELLQALLLLERERPQALPLGTGNAPRAEALRLRGPLLPLFASSEVESLLDDPQQPVLSTPVFGLGGPDGPLPYAYQE WLQQRARQKDHAPAEFLDLFQHRLLSLLYRVLRKHRVALGFAVPAATPVQAQLRALSGLLPKALQERLALPDSAVLARTALFAGGRRSLAGFAGLVRQHF GVEARLDAYQGAWKEIPAASRSRLQRGGRNLRLGRDAIAGTRTWDEHAGIALSLGPLDAREAARFFPDGDAHGQLASLAALYFGPDLDCRLSLLVSGGAP LRLERGAPPRLSWNTGLRRVEDSQRQRIDLDLRQPEVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site