Pseudomonas aeruginosa C51, Q090_05767
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa C51 genomic scaffold adgeS-supercont1.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCTCCAGGCTCCATACCGCGAACTGCTGCCGGTAGTCGCGGCGGTACTGCTCGCGATTGGCGAACCACTGGCTGGCCGGCAGTCCGGCCAGTTCCTT GAACAGCTCCGCATCCTTCACCGCGACGAAATCCACGGCGATCGGCGAGTCGTCGTTGGCGCGCGCGGCGACATCCAGGGTCAGCCGCTGCAACTCGACC CGCGGCGCGAAGAAATACGAGCAGCCGGCCAGCGCCAGGATCGCCAGCGCCAGGAAGAGTTTCCGACATATGGTGAAACATCCGTGCTTCATGGGAGTCC AACGAAAATTTTATTTTGCAAATCCATAGACCTGTTCTAGCGTCTTTTGTAGTTCGTCGCCAGTGACGGACCAGAGGGATCGCCAAGGACAGGTTCTGCG CCGTTTTCCCTGTCATGCCTGTGATCCAGCAAGGGACTGCGATGATCAGGGCATCCCCCCGATGCATTGCTCCCCCACCATTGCATCGGAGTCAGCCGCC
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| DNA Sequence for Gene |
>Q090_05767
ATGGCCGAGAGTACGCAGCACAAGCTGGACCGGGTGCGCCCGCCGCGCGTGCAGATCACCTACGACGTCGAGATCGGCAACGCCATCGAGAAGAAGGAGC TGCCCCTGGTGGTCGGCATCCTCGCCGACCTCTCCGGCAAGCCGGATACCCCGCCGGCGAAGCTGGTCGAACGGCGTTTCGTCGACATCGACCGCGACAA CTTCAACGAGATCCTCTCCTCCATCTCTCCCCGCGCCACCCTGCAGGTCGACAACACCATCAGCGGCGACGACAGCAAGCTGAACGTCGAGCTGCGCTTC AACCACATCGAGGACTTCGACCCGGTCAACCTGGTGAAGCAGGTGGTCCCGTTGCGTCGCCTGTTCGAAGCGCGCCAGCGCCTGCGCGACCTGCTGACCA AGCTCGACGGCAACGACGACCTCGACCAGTTGCTGCAGGACGTGGTGGCCAACACCGAAGGCCTGCAGGAAATCAAAGCGGCCCGCCCGGAAGCCGAAGC GGCCCCGGCCGGCGACAGCGAACCCCCGGCCGACCAGCCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTCTTCCCGGAGAAGCCGCCATGCCCAAGTCATCCGCCGCCGAACAATCCGGCGAGAGTTCGACCCAGACCCTGTCCCTGCTCGACGAGATCATCGCC AAGGGCCGCATGGCCCACGACGACAGCCAGCAGGACTATGCCCGCGACATGCTCGCGGAATTCGCCACCCAGGTCCTCGACGAGGGCATGGCCGTCGACA AGGACACCGTGGCGATGATCAACGACCGCATCAGCCAGATCGATGCGCTGATCAGCGACCAGCTCAACCAGATCATCCACCACCCCGAGTTGCAGAAGCT GGAAGCCTCCTGGCGTGGCCTGCACCAACTGGTGAGCAACACCGAGACCAGCGCGCGGCTCAAGCTGCGCCTGCTGAACGTCGGCAAGAACGAACTGCAG AACGACCTGGAGAAGGCGGTCGAATTCGACCAGAGCGCACTGTTCAAGAAGATCTACGAAGAGGAATACGGCACCTTCGGCGGACACCCCTTCAGCCTGC
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| Amino Acid Sequence |
>type VI secretion protein
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPDTPPAKLVERRFVDIDRDNFNEILSSISPRATLQVDNTISGDDSKLNVELRF NHIEDFDPVNLVKQVVPLRRLFEARQRLRDLLTKLDGNDDLDQLLQDVVANTEGLQEIKAARPEAEAAPAGDSEPPADQPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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