Pseudomonas aeruginosa PAO1, PA0705 (migA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCACGGAGCCATCATCGGCAGCCGCGCGCTGGTGACCGGCGATGTCGAGCCCTATGCCATCGTCGGCGGTAACCCGGCCCGGACCATTCGTAAGCGCT TTTCCGATGGCGATATCCAGAACCTGCTGGAAATGGCCTGGTGGGACTGGCCACTGGCCGATATCGAGGCAGCCATGCCACTGCTGTGTACTGGGGATAT CCCCGCCTTGTACCGGCACTGGAAACAGCGCCAGGCCACGGCCTGACGGTTGGACGAAGGAGGTCGAGGATTTTTCTCGGGCCCGATGGCCTACCCTCTA TGCTTCCGACGGTATACTGTCGCGATGCCTGGCCATCCAGGCATGCGTGCCAGAGCCACTCCAGCGACCGTAGCGGCGGAGCGAAACGCTGTGTTTCCGA CAGCCCGCGCCGAGCACCGATCGCCGGAACGATCGCAGGACTTCATGACCGACGGCCCCCTGGAACGGCTACCGGGCAAGACGAGTGACAAGAACGACAC
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| DNA Sequence for Gene |
>PA0705
|migA
ATGATTGAAGAAGCCACTTCCAGCAAGCACTCAGGCACGACGGACGCCCCGCTGGTATCCGTCGTAGCGCCCTGCTTCAACGCGGAAAAGTACCTGGAAG AAGCCCTGCGCAGCATCTACGAGCAGGACTACCCGAATTTCGAAGTGATCATCGTCGACGACGGTTCCACCGACAACAGCTACGCCATGCTGGAGCAGTT GCAGAAAGTCCACGGTTTCCAGCTCTACCGCCAGCAGAACCAGGGCGTCAGCGCAGCGCTGAACTTCGGCCTGCGACACGCCCGCGGCGACTACGTAGCC ACGCCGGACCTGGACGACATCATGCTGCCGCACTCGTTGAGCGTGCGCGCCGCGTACCTCGACCAGCACCCGGAAGTCGGCTGCGTCGGCGCCCTGGTGA TCTACATCGACAGCGAAGGCCAGGAAACCAAGCGGCAGAACGGCAATCGCATCCGCCAGCTGGACTTCGACTACCTGCTCGGCAACGCCTACGTCTGCGG CGCCCCGGTGTCCCTGTACCGCATGGAGGCCCTGCGCGCAGCCGGCTTCTACGATCCCGAGATCAAGGTGCAGGACTTCCAGATGACCCTGCGCATCGCC AGCCAGGGCTACCAGATCCACAAGCTGCCGGTACTGGTCACCCGCTACCGGCGCCACCCCGACAACCTGTCGCGGCGCTACAAGGTGCTGCTCGATGCCG ACCTGCGCACCATCGCCCCCTACCAGTCGCATCCCGCCTACGAGCGCGGCCGCACGGAGCTGGTCAACAAGGCCCTGAAATACGCCGTGGTCGCGGACAA GCGGCATGCCTGGCAACTGCTCCGCTCGCTGCCGCTGCGGCAGTGGAACCGCACCACCTTCCGCCGGTTGAAGCGCTTCCTTCTCCATCACGAGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCCGTCACCGCGAAGATTCGTCGTGCATGGGCTATACCTCCCCGATACACCTTGGTTTCGAATCGCCGCCCGACAACGGGTAGGCCGGCCGCTTGACGC CCGCGGCCGTTCTTCGAGGGAGCTTGAATGACCGCGCTGCACGACCTCCCGGGAACCCGCCTGCTGGCACTGTTCGCCCGCCGGGAACTCTCGCCTGGCG AGTACTACGAGCATCTGCTGGCCCACATCCAGCGCTGGGAACCGCATCTCAACGCGCTGTATCGCTTCGACCCGCAACGGGTTCGCGAACAGGCCGCGGC GGCCACCGAGCGCTGGCGCAAGGGACAGCCCAAAGGCCCGCTGGACGGGCTGCCGGTAACCATCAAGGAGCTGATCGCCACCGCTGGCGAACCTATCCCA TTGGGCAGCGCCGCCACCGCCCTGCAACCCGCGCCCTGCGACGCGCCGCCGGCCGCTCGGCTGCGCGAAGCCGGCGCGATCGTCCTGGCCAAGACTACGG
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| Amino Acid Sequence |
>alpha-1,6-rhamnosyltransferase MigA
MIEEATSSKHSGTTDAPLVSVVAPCFNAEKYLEEALRSIYEQDYPNFEVIIVDDGSTDNSYAMLEQLQKVHGFQLYRQQNQGVSAALNFGLRHARGDYVA TPDLDDIMLPHSLSVRAAYLDQHPEVGCVGALVIYIDSEGQETKRQNGNRIRQLDFDYLLGNAYVCGAPVSLYRMEALRAAGFYDPEIKVQDFQMTLRIA SQGYQIHKLPVLVTRYRRHPDNLSRRYKVLLDADLRTIAPYQSHPAYERGRTELVNKALKYAVVADKRHAWQLLRSLPLRQWNRTTFRRLKRFLLHHES
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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