Pseudomonas aeruginosa PAO1, PA0602
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCAGATGGCCGCCCGCGCCCTGAAGATAGGTGCTGCCGGCTATGCCACCAAGGACAGCGATCCGGCATTGCTGCTCACCGCGATCCGCAGGGTCGCCG GCGGCGGACGCTACATCGACCCGGACCTTGCCGATCGGATGGTCTTCGAGGTCGGCCTGACCGATTCGCGTCCGCCCCATGCGCTGCTTTCCGAGCGCGA GTTCTCGGTGTTCGAGCGGCTGGTGCAGGGCGCCAACGTCAACGAGATCGCCCAACAACTGGCGGTCAGCAACAAGACCATCAGTACCCACAAGGCACGC CTGATGCAGAAGCTCAACGCGCATTCGGTAGCCGACCTGGTGCGCTACGCGATGGAGCACCGCCTGCTCTGACAGGGGCGTTCGCCCAGGTTTTGCTCGC GGCTTGTGCGCCAGGTCCGGTTTTCGCGATCTGCTGTCTACCTGGCTTCCGCGCGGCAGGGAATGATGCTTGCCGGCCAACACGATAAGGAGAAGAAACG
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| DNA Sequence for Gene |
>PA0602
ATGTTGCCAGCCATGAGGACGGGCCTGTTGTGCGCCCTTCTCGGAGTTACCGCGCCCGCCTGGGCGGAATACGTGACCGTGATTTCCTTCGGCGGCGCCA ACAAGGAAGCCCAGGAAACCGCGTTCTACAAACCCTTCAAGAGCGCCACCGGCAATCGCGTGGTGCATGGCTCCTACAATGGCGACCTGGCCAAGCTCAA GCGCATGGTGGAGATCAGCCACGTCTCCTGGGACGTGGTGGAAGTCGAGGCGCCGGAGCTGGCGCGCGGTTGCGAGGAAGGTCTGTTCGAGAAGCTGGAC ATGGCGAAGGTCGGCGATCCCGCGGATTTCGTTCCCGGCGCGGTGCAGCCCTGCGGAGTCGGCATCTTCGTCTGGACCACGCTGCTTGCCTACAACCCCG GCAAGGTTGCGGGCAGCCCGCAGGGCTGGGCGGATTTCTGGGACGTGAAGAAGTTTCCCGGCAAGCGCGGCCTGCGCTGGGGCGCCAAGTACAGCCTGGA GTTCGCCCTGATGGCCGATGGCGTGGCGCCGAAGGACGTCTACCAGACGCTGGCGACGCCCGCCGGCGTCGAGCGGGCATTCCGCAAGCTCGACGAGCTG AAGCCCTATATCCATTGGTGGAAGTCCGGGCAGGACCCTGTGCGCGACCTGGCCGATGGCACGGTGGTGATGAGTTCGGCCTACAACGGGCGGATCGCCG CGGCGCAGGCCGAGAAGCAGCGCCTGGCAATGGTCTGGAGCGGCGGCGTCTACGATTTCGACTTCTGGGCGCTGCCGGTCGGGGTTTGGAAGAAGCAGTT GGCCGAGGAGTTCATCCGTTTCGCCAGCCAGCCGGAGCAGCAGAAGGCTTTCGCCGAGAACATCGCCTACGGCCCGGCCAACCGCAAGGCGGTAGGCCTG CTCGATCCGCAAGTGGCTGCCAACCTGCCGACCGCGCCGCAGAACATGCAGAACGCGGTGGGTATGAACGTGGCCTTCTGGGCGGAGCACGGCGAGGCCC TGGAGCAGCGTTTCCAGAACTGGGCCAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGCCGTTGCGCGCCAGCCGGAGAGCGCTGGCGCGCAAACCTTTGCTCTTCTCGAAAGCTCCTTCCCAGAGCGGTTCGGCCCATTCCGGGATGCATCT TTTTTGTAGGGCGATTCCTACAAAGAGCTTTCCTTTCCCCTGATAGAAAACTCTCTTGCCGGCCGATTTGCGTCCTGCGCCGGGTTCTCTAGGCTGTTCG CACAGCATCCATAAAACGAACAAAGGTGCGGTTATGGCCGAGACTCAAGGCGGCGATGTGCTGGTCAGCTTCCGTGGCGTGCAGAAAAGCTACGACGGCG AGACCCTCATCGTGAAGGATCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCCTGCTCGGCCCCTCCGGGTCCGGCAAGACCACCAGCCTGATGAT GCTGGCCGGTTTCGAAACCCCCACCGCCGGCGAAATCCTCCTGGCCGGTCGCTCGATCAACAATGTCCCTCCGCACAAGCGCGACATCGGCATGGTGTTC
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| Amino Acid Sequence |
>probable binding protein component of ABC transporter
MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLD MAKVGDPADFVPGAVQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDEL KPYIHWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMVWSGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGL LDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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