Strain | Pseudomonas aeruginosa CF77 genomic scaffold adgeU-supercont1.7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCAGCCGCGAGAGCCTGGCGCGCACCGCCTTCCAGCACCTGAAGGTGGGCAGCCGGGTGAACCTGGAAAAGGCCCTGACGCCGACCACCCGCCTCGGCG GACACCTGGTGAGCGGCCACGTCGACGGCGTCGGCGAGGTGCTCAAGCGCGAGGAGAACGCCCGCGCCATCCAGTTCACCGTGCGTGCCCCGCGCGAACT GGCCAGGTACATCGCGCACAAGGGCTCGATCACCGTCGACGGCACCAGCCTCACGGTGAACGCGGTGAACGGCGCGGAGTTCGAGCTGACCATCGTCCCG CATACGCTCAGCGAAACCATCATGGCCGAGTACCAGCCCGGACGCCGGGTCAACCTCGAGGTCGACCTGCTGGCCCGTTACCTGGAGCGCCTGCTGCTTG GCGACAAGGCCGCCGAGCCCAGCGCCTCCGGCATCAGCGAAGCGTTTCTCGCCGAGAACGGTTTTCTCAAGTAACCCACGAATTGCATAAGGGGGTGCCC
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DNA Sequence for Gene |
>Q092_05603
ATGGCACTCAACACGATCGACGAACTGATCGAAGACATCCGCCAAGGCAAGATGGTCATCCTGATGGATGACGAGGACCGCGAGAACGAAGGCGACCTGA TCATGGCCGCCGAATGCGTCCGCACCGAAGACATCAACTTCATGGTCAAGCATGCCCGCGGCCTGGTCTGCATGCCGATGACCCGCGAGCGTTGCGAGCG CCTCGGCCTGCCGCTGATGGTGCAGCGCAACGGCTCCGGCTTCGGCACCAAGTTCACTGTCTCCATCGAGGCCGCCGAGGGCGTCACCACCGGCATCTCC GCCGCGGACCGCGCCCGCACCGTGCAGGCTGCGGCGGCGAAGAACGCCGTGGCCGCCGACATCGTCAGCCCCGGCCACATCTTCCCGCTGATGGCCCAGC CGGGCGGTACCCTGGCTCGCGCCGGGCACACCGAGGCGGCCTGCGACCTGGCGCGGATGGCCGGGTTCGAGCCGTCCGGGGTGATCTGCGAGGTGATGAA CGACGACGGCAGCATGGCTCGCCGGCCCGAACTGGAGGCGTTCGCCGCCGAGCACGGGATCAAGATCGGCACCATCGCCGACCTGATCCACTACCGGCTG ATCCACGAGCGCACCGTCGAGCGCATCGCCGAGCAGCCGCTCGACAGCGAACTGGGCCACTTCAACCTGATCACCTACCGCGACTCGGTGGAGGGCGACG TGCACCTGGCGCTGACCCTCGGCAAGGTCTGCGCGGAAGAGCCGACCTTGGTCCGCGTGCATAACATGGACCCGCTGCGCGACCTGCTGCAGGTCAACCA ACCGGGCCGCTGGAGCCTGCGCGCGGCGATGACCAAGGTCGCCGAGGCGGGCAGCGGCGTGGTGCTGCTGCTCGGTCACCAGATCGGCGGCGACGACCTG CTCGCCCATGTCCGCGAGATCGCTTCGGCGCCGGCTCCGGCGCCCAAGGCCACCACCACCTACAGCACCGTCGGTGCCGGTTCGCAGATCCTGCGCGACC TCGGCGTGCGCAAGATGCGCCTGCTGAGTGCGCCGATGCGCTTCAATGCGATATCCGGTTTCGACCTGGAAGTTGTAGAATACCTGCCCGCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCTGTCCCGCCCGCCGCGTGCAAGATCGCGGTGGGCGCTATGCTGGACGGACCTTTCGACCCTTTTCGCTCGGGGCGCAACGGCGTCCCGGCTCTTTA ACAGATGAGACCTGCTCATGACCCTGAAGACCATCGAAGGTACCTTCATTGCCCCCAAAGGCCGCTACGCCCTGGTGGTCGGCCGCTTCAACAGCTTCGT CGTGGAAAGCCTGGTCAGCGGCGCCGTCGACGCCCTGGTCCGCCACGGCGTGGCTGAAAGCGAGATCACCATCATCCGCGCCCCGGGTGCCTTCGAGATC CCGCTGGTGACCCAGAAGGTCGCCCAGCAAGGCGGCTTCGACGCCATCATCGCCCTCGGCGCGGTGATCCGTGGCGGCACCCCGCACTTCGAATACGTGG CTGGCGAGTGCACCAAGGGCCTGGCCCAGGTGTCCCTGCAGTTCGGCATCCCGGTCGCCTTCGGCGTCCTCACCGTCGACTCCATCGAGCAGGCCATCGA
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Amino Acid Sequence |
>3,4-dihydroxy-2-butanone 4-phosphate synthase
MALNTIDELIEDIRQGKMVILMDDEDRENEGDLIMAAECVRTEDINFMVKHARGLVCMPMTRERCERLGLPLMVQRNGSGFGTKFTVSIEAAEGVTTGIS AADRARTVQAAAAKNAVAADIVSPGHIFPLMAQPGGTLARAGHTEAACDLARMAGFEPSGVICEVMNDDGSMARRPELEAFAAEHGIKIGTIADLIHYRL IHERTVERIAEQPLDSELGHFNLITYRDSVEGDVHLALTLGKVCAEEPTLVRVHNMDPLRDLLQVNQPGRWSLRAAMTKVAEAGSGVVLLLGHQIGGDDL LAHVREIASAPAPAPKATTTYSTVGAGSQILRDLGVRKMRLLSAPMRFNAISGFDLEVVEYLPAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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