Strain | Pseudomonas aeruginosa CF77 genomic scaffold adgeU-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCCTCTACGGCTGCGACTCGATCAACGGCAACAACGTATCGAAATGGTGCGACGCGGCCTACGACAAGCTGGTCAAGGCTGCCAAGCGGGTCTCCGACC AGGACAAGCGCAGCGAGCTGTACAAGCAGGCCCAGCACATCCTCAAGGAGCAGGTGCCGATCACCCCGATCGCCCACTCCACCGTGTACCAGCCGATGAA CAAGTCGGTGCATGACTTCAAGATCAGCCCCTTCTCGCGGAACGCCTTCTATGGCGTAGCCAACCAGCCCTGATGCCGACGCCACCCCGGTCGTGAAACG ACCGGGGTGCAGAAGAACGGCACGACCCGTACTTCATTTCTTTGCTTTTCCTGCCCGTGTTCCAGAACGGCGCTGCGCGCGTTCCGCCAGGAGCGCTCGC CTCGCCGTATTCGACCGCCGCGCCCAGGCGCGGGCGAAACCGGCGCAAACCTGGTGGGTAAAACAGGTGCCATGACAACAATAAAGGGAGCAATCAGGTG
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DNA Sequence for Gene |
>Q092_04534
ATGAGATACCAACGAGTGACCGGCGCGACGCTGGGATTGGCCTTGATGGCATCGGCCGCGCCAGGCTGGGCAGCGGACGAGCAGGCAACCCCGCCGACCC CGGACAATCCCAGCTACGCCGCCCAGGTGCAGAGCATCCCCAGCGTGGAGAAACCGATCAAGGGCCAGGCCGGCGCCAGCGGGCTGTTCGAGGGGCAGAG CCTGACCCTGACCACCCGCAACTTCTACTCGCGGGAAAACATGAAGGACAGCTTCACCTTCCGCATTCCCAAGGCCGGCGGCGGCTCCCAGCGCATCCAC CAGCGCAACGCCTGGGTCCAGGGCACGGTGCTCAAGTACAGCTCGGGCTACACCCAGGGCAGCATCGGCTTCGGCTTCGACGTCGCAGCCTTCAACGAGA TCGCCCTGGAGCGCGGCAAGGGCCGCATCGGCGGCGGCGGCAACCGGACCCTGGCGAACAGCGATGGCGAGGCGATCGGCGAGTGGTCCAAGCTGGGCGT CGCCAACATCCGCCTGCGCGCCTCGAATACCGAATTCAAGGCCGGTCGCTTCCTGGTCAACACTCCAGTGTTCAGCTATATCGACAACCGTGCCCTGCCC TCCAGCTTCACCGGCTTCGCCGTGACCAGCGAGGAGCTGGACAACCTCAGCCTGCAGGCCGGCAGCTTCCGCAAGGTCAGCCCGCGGACCGGTTCCGGCG ACGAGGACATGACCACCGAGTACGGCACCCGCCAGGTCAAGGGCGACCGCCTGAACTACCTGGGCGGCAACTACAAGCCGCTCGACGGGCTGGAAATCTC CCTCTATGGCTCGCATTTCCAGGACGTCTGGAACCAGTACTACCTGGGCGTGACCCACGACATCGGCGACCTCGAGAACGGCATCGCCCTGCGCACCGCC TTCAACGGCTACCACACCGGCGACACCGGCGCGCGCGAGGCCGGCTACATCGACAACGACACCTGGAGCCTGGCCTTCACCCTCGGCCATCGCGCCCACG CCCTGACCCTGGCCTACCAGCAGGTCGACGGCAACGAATACTTCGACTACGTGCACGAGACCTCGGCGATCTTCCTGGCCAACTCGATGCTGGCCGACTA CAACAGCCCCAACGAGAAGTCCGCGCAGATCCGCTACGAGACCGACTGGAGCTACTACGGGGTCCCCGGCCTGAGCACCGGCGTGTGGTACGTGAAGGGC TGGGACATCGACGGCACCCACTACGACGGCGATCGCAACGGTGCCTACGGCAACTACGCCGAGGTGCGCGCCCAGGACGGCGAGAAGCACCACGAGCTGG GCCTGATGGCGGCCTACAAGGTGCAGAACGGGCCGATCAAGGACAGCACCTTCAAGCTCACCTACATGATGCACAAGGCCAGCCAGAACCAGGTCGACGG CAGCGTCAACGAACTGCGCCTGGTCAGCACCTTCCCCTTCAACCTGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCTGCGACAACCGGCGGCCCCGGCGACGGGGCCCACGAGGAGGACCCCATGCTCCATCCGTTGCTCCGACACCTGCCCCTGGCCCTGGCGCTATGCGCC GCCGGCGCGGCCCAGGCGAAGAACCTGGTGGTCTGCACCGAGGCCAGCCCGGAAGGCTTCGACATCGTCCAGTACACCGGCGCGGTGACCGCCGACGCCT CCGCGGAAACCGTGTTCAACCGCCTGCTCGCCTTCCGCCCCGGCACCACCGAGGTGATCCCGGGGCTGGCCGAGCGCTGGGACGTCAGCGCCGACGGACT GAGCTATACCTTCCACCTGCGCCCCGGCGTGAAATTCCATACCACCGACTACTTCAAGCCGACCCGGAGCCTGAATGCCGATGATGTGCTGTGGACCTTC CAGCGCGCCCTCGATCCGAAGCATCCCTGGCATGCCTCGGCGCTGCGCGGCTACGCCTACTTCGACGCGATGGGCATGGGCGAGCTGATCAAGTCGGTGG
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Amino Acid Sequence |
>hypothetical protein
MRYQRVTGATLGLALMASAAPGWAADEQATPPTPDNPSYAAQVQSIPSVEKPIKGQAGASGLFEGQSLTLTTRNFYSRENMKDSFTFRIPKAGGGSQRIH QRNAWVQGTVLKYSSGYTQGSIGFGFDVAAFNEIALERGKGRIGGGGNRTLANSDGEAIGEWSKLGVANIRLRASNTEFKAGRFLVNTPVFSYIDNRALP SSFTGFAVTSEELDNLSLQAGSFRKVSPRTGSGDEDMTTEYGTRQVKGDRLNYLGGNYKPLDGLEISLYGSHFQDVWNQYYLGVTHDIGDLENGIALRTA FNGYHTGDTGAREAGYIDNDTWSLAFTLGHRAHALTLAYQQVDGNEYFDYVHETSAIFLANSMLADYNSPNEKSAQIRYETDWSYYGVPGLSTGVWYVKG WDIDGTHYDGDRNGAYGNYAEVRAQDGEKHHELGLMAAYKVQNGPIKDSTFKLTYMMHKASQNQVDGSVNELRLVSTFPFNLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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