Pseudomonas aeruginosa CF77, Q092_03670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF77 genomic scaffold adgeU-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGATAGATGTCGCTGGTCAGGCGTTCCTCGTAGCCGTGCAACTGGTCGGGACCGCAGAAGTGCATCTTGCCCGACAGCGCCGTGCGATAGCCGAGCTT GCGCAGGTAGTGGGCGTAGGTGGGGGTATCGGCGGCGAAGTCGGCGGCGTTGTCCCAGGCGCCGATGCGGGTAGGCAAGCGACCGCTGACCAGGGTGAAG CGCGACGGCGCGCAGAGCGGGCTGTTGCAGTATGCCGAGTCGAACACCACGGCCCGTTCGGCGAGGCGCGAGAGGTGAGGCATGCGCAGCGCCGAGCGCG GATCGTGAAGCGGCAGCAGCGGCGCGGCCATCTGGTCGGCCATGATGAACAGGATGTTCGGCGAGGTCTTCATCGGGCGGCTTATCCCATGCGATTGGGT TATGCGATAGTGCTGCGTCGATCATCAGTGCATCGAAATCCCTGGTAAACCGCATGGGGCTGGATGCGTTGGATAAGCCTGGCTTATGGGAGAACGCCTC
|
|
| DNA Sequence for Gene |
>Q092_03670
ATGCCGCTGTCCCTCGACCTGCTCCGGGTATTCGAGTCCGCCGCCCGCCAGCTCAGCTTCACCGCTGCCGCCGAGGAGCTGGGGACCACCCAGCCTGCGG TCAGCCAGCAGATCAAACGCCTGGAGAAGGAGCTGGCGACCCCTCTGTTCCAGCGCGTTCATCGAGGCATCGTGCTCACCGACGCCGGCCAGCTCCTGCT CCGCCACGTGGCCGCCGGCCTCGAGACGATCGATGCCGGCATCGCCGCGCTGGGCGCGCGCCAGCGCCACGAGGTGCTCCAGGTGGCCACCGACTACGCC TTCGCTGCCTACTGGCTGATGCCGCGCCTTCCGCGCTTCCACCAGGCCCATCCGCACCTGGACGTGAGCCTGGTGACCAGCGAGCGCGGCCTGGCCGGCC AGCGCGGCGATATCGACGTGGCGATCCTGTTCGGCGACGGTCGTTCCAAGCACGGCGAAGCGCACCGGCTGTTTCGCGAGGAGGTGTTCCCGGTCTGTAG CCCGCGGCTGGTCGAGGGATTGCAGTTGCCGCTGGCCAAGGCGCACCTGGCGCGCCTGCCGATGCTGCATCTGAAGCCGGCGCAGCACGCCCGCTGGTTC GACTGGCCGGCGTTGTTCGAAGCGTTGGCCATCGATCGGCAGCCGATTCCGGCGGTGCTCAGCTTCGACAACTACACCTTGCTGATCCAGGCGGCCATCG CCGGCCAGGGCGTGGCCATCGGCTGGCGCCACCTGGTCGACGGCCTGCTCGAACAGGGGCTGCTTTGCCGGCCCATTGGCGAGAGCTGCCTGTCGCGATA CGGGTACTATGCGGTATTGCCGGAGCGCAAGCGGCGCCAGCGGCTGGTCGACGGTTTCGTCGACTGGCTACAGGCCGAGTTGCAGGCCGGCGGCGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGAGGTGACGATGAACGAGTATTCCACCCCCCGCATCCAGGGCTTCCATGCTCACGTCTATTTCGATGCGCAGAGCATCGAGCGAGCCCGCGCCCTTTGC GAAGAGGCGGCGCGGCGCTTTCCGCTGAAGATGGGGCGGGTCCATGAGCGGCCGGTAGGGCCGCATCCGGACTGGAGCTGCCAGCTGGCGTTCGCTCCCG AGGTGTTCGGCGAGCTGGTGCCCTGGCTGGCTATCCATCGGCAGGACCTGGTGGTGTTCATCCACCCGGTCACCGGCAACGATCTGCTCGACCATCGCGA CCGAGCCATCTGGATGGGAGCCATTCGCCCGCTGGACCTGTCGATCCTGGACGAAGGCCCGCAACGCTATGACTTCGCCGTGCCTTGAGGCGCGGTCATC GTCATCCAGTCGTGCAGTTCGCATTGCAGCTCGCCCAGTGCCGTCACCAGGTCGTCGACGGCATCGGCGAGCTTGCGCACGGAGCTTTCGCCGCAGGCGA
|
|
| Amino Acid Sequence |
>LysR family transcriptional regulator
MPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDYA FAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWF DWPALFEALAIDRQPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|