Pseudomonas aeruginosa CF77, Q092_02004
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF77 genomic scaffold adgeU-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGGGCCCCTCACAGTTTATGAATCAAAGACTTTGGCCCCAACTGGGTGCCGAATGTGAAGGTGCATGGTTAACAGACGATCGGGGCACAGAGCTAGCAT TCGGTGGGGTGAACCTTTGCCTAAGAGACTTTGCACGCATTGGTCTATTATTTCTTCATGGCGGTCGCAGCCTGACTGGAAGTCAAATTGTAAGTGCTGA GTGGGTCAAGGCATCAACCAAACCTCGGAGTGCTCACTTGCGTCCTGGACGTTACATAGAGGATGGTGAGCCAAATCTTGGGTATGGTTACCAGTGGTGG ATTCCAGAAGGCAAAGAAGGGGAGTTCTTGGCTATCGGAGTGTACGGGCAGTTTATTTATGTAAACCCACTAAGGCGTGTGGTGATTGCAAAGACCTCCG CGTATGTCGACTACAACGTTGACGGCATCCGTATGGAGCATGAGGCACTTGCAGCGTTCAGGGCTATATCAAGAACAGTAGGGGTGAGGTGAATATAGAC
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| DNA Sequence for Gene |
>Q092_02004
ATGGTGACCGAACACATATTTGATTTTGAATGGCGCCCTCTGCAGAACTATCTTCGTGATCGAGATATCGCAATACCACCCTTTGCGGCAGATCAAGAGT CAAGAAGTGACGCACTTTACAACTGGATAGTTAGCAAGGGGTATTCAGGAAAAGAAGGACTGAATCTTGGTACTTATTACCATATATCTGATTATGGCGT GATAGGATTGGCGTTGCTATGCGCTGAGAACGTAGGTGATATTTTGAAAGTCATAAAGGCCTATGTCAAGTTGTTCAATCGTGATATAGCTAATGTTGAC GTCAAGCCTAGGGAGAATTACGAAGTAGAAATCCATATTTCAGTTAACTTTAAGCCGGAGTGGAATGACGCATCCCGTCAGTTTCATGTAAATGTTATAG CCTCTGCAACCTACAAGCTCATTATGGACCTGTTAGGTAATGACTTTCCCATCTCTGCATTGACAGTACCTGTGCATGGCGCAGATAAAACAATCTATGA AGGTTTCTTTTCTTTGCCTGTGAAGCATGAAGGAAGTGACATAATATTTAGCTTTCCAGCTCATCAGTTGAATAGAACACTGGCGACTGCCAATCCGGCG GTATTTCAGTCAGCCCTGAATATGGCAGGTGAGAGTTTCAATGCTCTGTTGGAAGTAGAGATGGGAGGGCTCCGTCAGCGAATCGAGTTATTCCTTGAGT CCATACCAGATCAATACCCTAGCTTGGTGACTACCGCAAAGTATTTATGCATGAATGAGCGGACGGTAAGACGTCGCCTGGCGGACGAGGGATGCACTTA TCGCCAGATTGTAGATAAGGCCCGCAAAGAACGAGCAATTGCACTGCTACTGAATTCATCTATACCAGTTGATCGTATTAGCGATATTCTGGGGTACTCG GAAACAGCGAGTTTTAGACATGCATTCAGACGTTGGACCGGGCAGTCTACTACAGAATTCAGAAACAGTTTCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTATCTAGTTTGAGATTGGGCAAGGAGCATCTTATGAATTTCAATAATCGTAATAATCAGATTCTGTCTATGATTGCCGAGACTCAGTTCGATGCTTAC GTTTTGGGCTATATTGCGAAGGCGCGGACAATCTCGATTGCTGATGATTCCCTTCGCATTGAGGCCGAAGGATCAGCAATGCTTGCTGGACTAATTAGCG ACTCATGCAGGAAACGTCGAACTCAAAAGAATCCATTTCCATATTTGCTACTTCAGATCGCGCACGAAGCCTTGGATCGAACCAGGCTTAATCTCGCAAA TGTTCGTAATATATCTAGCGCTGATGCATTGTATAAAGAGCTGCTTAGTCAGGCTGCGTGGGACGCCTCAGTTGCTATGGATAATATATCGGAATTTGTC GAGCCAGATCAGGGTAGCGTCGGAGTAATCGAGCGACTTGTCGAGTTTGCACATAATTCGGGTATTGCAGAAGGTCAAAACCTGGCGCTGGAAGCTCTTG
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| Amino Acid Sequence |
>transcriptional regulator
MVTEHIFDFEWRPLQNYLRDRDIAIPPFAADQESRSDALYNWIVSKGYSGKEGLNLGTYYHISDYGVIGLALLCAENVGDILKVIKAYVKLFNRDIANVD VKPRENYEVEIHISVNFKPEWNDASRQFHVNVIASATYKLIMDLLGNDFPISALTVPVHGADKTIYEGFFSLPVKHEGSDIIFSFPAHQLNRTLATANPA VFQSALNMAGESFNALLEVEMGGLRQRIELFLESIPDQYPSLVTTAKYLCMNERTVRRRLADEGCTYRQIVDKARKERAIALLLNSSIPVDRISDILGYS ETASFRHAFRRWTGQSTTEFRNSFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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