Pseudomonas aeruginosa CF614, Q093_06271
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF614 genomic scaffold adggb-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCTTGATCAGATCAAGCTGGCCGGGGCCGTCTTTGTCCACTTCGTTGCCGGTCGTACCGAAATCCAGGGGAACGGTGATCTTGCTGTCGAAGGAGAG GATGCGGTCCTGCAATTCCTCTGCATGCTTCATGACTTTGCGTGGGTAGCTGGCGCTGCTCGGCCCGAAAGCTTTCCAGGCCAGCAGGCCTGCGCCGACG AGAGTAATGAAGAGGATCGGTAAGCCTAAGTAGAGGGCCTTGCTTGTACGTGGTCTGGTCATTGCCATCTCAGTCAGGGTCGAGATCGAGGAGCGCCGGC GGTTGCCTGTCGAAGCGGGCCCACCTGTCAGGGAGGAACGAGGCGGGAGAGGGAAAATTTAGCCATGGCCCCTCTCGACCATGGTGTCGAGGCTTGGTGG CGTGCCAGTAAATTTGCCGACGGACGGAACGTTCTAGCTGGATAAAGCGGGCTTCGCGGTTGACACAGGTAGGACGATGACGGTTTCTCGACGAGGTTTC
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| DNA Sequence for Gene |
>Q093_06271
ATGGCCGGCTTGGCGCTGACCGGAGCGGCGGCGTTGCCGGTGGCTTACTACACCCGCCGTCACTTGGCCCGCGAAGAAGAGGAACCGCCCACGGCCGACG AGGCCGTGCTCGATCTGGCCGATACCGCGGGTATGCGCCTGGGTGGTCGCTTGCGTGGGGTGTGGGACCTGCGTCTGGTCGGTGCTGATGCTGGCTTGCC CGGCCTGCCGGCGGAAGGCTTGCAAATGGTGCTGGATGTCGCTCCCAAGGGGCGTGGCCTGATTGGCTATCTCGATACTCCTACACGACTGCTGTCGAGC GATGAGCCCAGGTTCCGTGTGAGCGGCGACCTCGTTGGAGCCAGTTCGGCGCGAATTCGCTGGCGCCTGGTCGACCAGGCTTCGGCGTCGATGGCGCCGA CCCATGACTGCTCCGCAGTCTTTGATGAAGTCTGGGATAATTTCGCCAATGCCGGGGACGGCACGCTGAGCGGGCATATCTTGCGCCTGGATCGTTCTCC GGGGCTGCCGGAGGAAGATTTCCGCTTCGTAGCGGTCAAGCGACACTTTCCGCCAGCTCGCGAACGCATCGCTCTCAACGAGAAATTGCTGGGATGGTTA GTGTCGCCGCAGCACCGGTTGTTCCACCAGCTATGGCACGCCTCGCGGGACAAGTGGCATCAACTGTCGGAGAAGCAGCGCAATGCGTTGCGTGGGGTGG GCTGGCAGCCTGGCCCGCTGGACCGGGAGCGCGATGCGCGGGGGCCAAGAAAGGATCGCAACGCTTCTGGTATCGACTTCCTTTTCATGCATCGGCATAT GCTGCATACCGCACGATCCATGCAAGACCTGCCATCCTGGAGGCGTTTGCCGCGCCCCGCGGTTCCGCTGGAATTCGATCGTCCCGGCTTCATCCGCTAC TTCGACAATCCAGATGGTTTCTCCGTGCCGCCGGCCTGGGTAGCGGTCGGGGACGACGAATACAGCGAATGGCTGCGTGGGTTGAAAAGCGCAGAAGCGT ACCATTCCAATTTCCTGGCCTGGGAGTCGCAGTACCAGGATCCGGAATATCTGGCGAAGTTGACCCTGGGACAGTTCGGCTCGGAGATGGAGCTGGGTAT GCACGATTGGTTGCATATGCGCTGGGCGACCGTGACCCGCGACCCATCCAACGGGTCGCCGGTCATGGGCGACCGCGTCCCGTCGGATTTCTCGCCGCGC TGGTTCCGCCCGGAGAACGATTTCCTCGGCGATCCGTTCTCGTCCCATGTGAATCCCGTGTTCTGGTCCTTCCATGGCTGGATCGACGACCGTATCGAGG ATTGGTACCGTGCCCACGAGCGTTTCCATCCCGGCGAAGTGCGGCGTCGAGAGGTGCAGGGTATTCCCTGGTTTGCGGCTGGGCGCTGGGTGGAGGTGGA CGACCCTTGGCTCGGCCCGGCGACCCATGGTTGCGGCCTGTCGGATCTGCAGGCGAGCAGCAACTCGGTGGAGCTGGACGTGGAAACCATGAAGCTGGCT TTGCGCATCATCTTCAGCGAAGAAGACCAGCTGAGCGGCTGGCTCAAGCGTGCGCCGCGGCGGCCCTGGTACGCGCGCAACCTGAAGCTGGCGCGCGACC AGCTCAGGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCGAAAGAGCGAGTAAGGATGGAGGAGGCCCGCGCAACGCGGGCCTCAGTCTTTCCGCGCGAGACCCTGGCGGTCGCTCTGCCAGCCGCCGCCGAGG GCCTTGTACAGGCCGACCGAGGCCTGCAGGCGGGCCAGTCGCAGTTGCACGGCGGCATCCTGCGCCGCGTACAGCGTGCGTTGCGTTTCGAGGACCGTCA GCAGGGTTTCCGCGCCGGCCTGGTAGCGGCTGTCGGAGAGATCGAAGGCGCGCTGCGCCTGCTCCAGCTCCTGCTGCTGCCAGTGCAGCTGGCGGTCGAG GCCGTCGATGCTGTTCAGCGAGCGTTCGGTGTCGGCAAAGGCGGTGAGGATCGCCTTGCGGTAGGTTTCCAGCAGTTCTTCCTGGCGCGCCAGGCTGCGG TCGCGCTCGGCGCGCAGGCGGCCGTGGTTGAAGATCGGGGCGAGCAGGTTGGCGCCCAGGTTGTAATAGGGGTTGCGGAAAGTGTCGGCGGCGCGGTTGG
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| Amino Acid Sequence |
>protein PvdP
MAGLALTGAAALPVAYYTRRHLAREEEEPPTADEAVLDLADTAGMRLGGRLRGVWDLRLVGADAGLPGLPAEGLQMVLDVAPKGRGLIGYLDTPTRLLSS DEPRFRVSGDLVGASSARIRWRLVDQASASMAPTHDCSAVFDEVWDNFANAGDGTLSGHILRLDRSPGLPEEDFRFVAVKRHFPPARERIALNEKLLGWL VSPQHRLFHQLWHASRDKWHQLSEKQRNALRGVGWQPGPLDRERDARGPRKDRNASGIDFLFMHRHMLHTARSMQDLPSWRRLPRPAVPLEFDRPGFIRY FDNPDGFSVPPAWVAVGDDEYSEWLRGLKSAEAYHSNFLAWESQYQDPEYLAKLTLGQFGSEMELGMHDWLHMRWATVTRDPSNGSPVMGDRVPSDFSPR WFRPENDFLGDPFSSHVNPVFWSFHGWIDDRIEDWYRAHERFHPGEVRRREVQGIPWFAAGRWVEVDDPWLGPATHGCGLSDLQASSNSVELDVETMKLA LRIIFSEEDQLSGWLKRAPRRPWYARNLKLARDQLRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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