Pseudomonas aeruginosa PAO1, PA0510 (nirE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGCTCTTCGAACGGGCCGACCAGGACATCCGGCAGGGGCGCGACAGCGACTTCGTCACCGGCAACAACGACGCCGACGCGATCCTTCTCCTCGACTGG CTCAAGCGCCGCCGCCCGCAGCAACTGGCGCGTCTCTGCGAGCTGCTGCTGGACTGGGGCGGCAACGCCTCGGGCGAGGGCATCGCCAACATCGACAACA CCGGCGAGGTGCATCCGGACAGCTACTGGTGGCACCACAGCGTCGGCAACATCCGCCATCAGCGCTTCGCCGACTTCTGGTTCGAGCGCCCCGACCCGCT GCTCCTGCAACTGCGCCAGCGCCCGCGACCGGTGGTCGGGCGCTGCAGCCAATGCCGCTGGCTGGACATCTGCAACGGCAACACCCGCACCCGCGCCTGG GCCGGCGGAGAACTCTGGGGCGAAGACCCCGGCTGCTACCTCAGCGATCAGGAAATCGGCCTCGAGCGCATCGCGCTGCACGCCGTCTAAGGAAAGCCTC
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| DNA Sequence for Gene |
>PA0510
|nirE
ATGAACACTACCGTGATTCCGCCGTCCCTCCTCGATGTCGATTTCCCTGCCGGCAGCGTCGCCCTGGTCGGCGCCGGCCCCGGCGATCCGGGCCTGCTCA CCCTGCGCGCCTGGGCCCTGCTGCAACAGGCCGAGGTGGTGGTCTACGACCGCCTGGTCGCCCGCGAGCTGATCGCCCTTCTGCCGGAAAGCTGCCAGCG CATCTACGTCGGCAAGCGCTGCGGCCACCACAGCCTGCCGCAGGAAGAAATCAACGAGCTGCTGGTGCGCCTGGCCCGGCAGCAACGCCGGGTGGTCCGC CTGAAAGGCGGCGACCCGTTCATCTTCGGTCGCGGCGCCGAGGAGCTGGAGCGCCTGCTCGAAGCCGGCGTCGACTGCCAGGTGGTCCCCGGCGTCACCG CCGCCTCCGGTTGCAGTACCTACGCCGGCATCCCGCTGACCCACCGCGACCTCGCCCAGTCCTGCACCTTCGTCACCGGCCACCTGCAGAACGACGGCCG CCTCGACCTCGACTGGGCCGGCCTGGCGCGTGGCAAGCAGACCCTGGTGTTCTACATGGGCCTGGGCAACCTCGCCGAGATCGCCGCGCGCCTGGTCGAG CACGGCCTCGCCAGCGACACCCCGGCGGCGCTGGTCAGCCAGGGCACCCAGGCGGGCCAGCAGGTGACCCGCGGCGCCCTTGCCGAGCTGCCGGCGCTGG CGCGACGCTACCAGTTGAAGCCGCCGACGCTGATCGTCGTCGGCCAGGTGGTCGCGCTCTTCGCCGAGCGCGCGATGGCGCATCCGTCATACCTGGGCGC CGGCTCGCCGGTCAGCCGCGAGGCCGTCGCATGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGCCTCGCCCTCGGCCTGCTCCTCGGCGCCCTCGCACAGGCCGGCGAAGCGCCGGGGGAAGCGCTCTACCGCCAGCACTGCCAGGCCTGCCACGGCGC CGGGCGGCTCGGCGGCAGCGGCCCGACCCTGCTCCCGGAAAGCCTTTCGCGGCTGAAGCCGGCGCAGGCCCGCGAGGTGATCCTGCACGGTCGTCCGGCA ACCCAGATGGCCGGCTTTGCCGGTCAATTGGACGACGCCGCGGCGGACGCCCTGGTCGCCTATCTCTACCAGGCGCCGCCGCGCGAACCGCAGTGGAGCG CCGAGGACATCCGGGCCAGCCAGGTTCAGCCGCATCCCCTCGCCACCCTGCCGTCCAGGCCCCGCTTCGAGGCCGACCCGCTGAACCTGTTCGTGGTGGT GGAGTCCGGCGACCACCACGTGACCATCCTCGACGGCGATCGCTTCGAGCCCATCGCCCGCTTCCCCTCGCGCTACGCCCTGCACGGAGGTCCGAAGTTC
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| Amino Acid Sequence |
>NirE
MNTTVIPPSLLDVDFPAGSVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVARELIALLPESCQRIYVGKRCGHHSLPQEEINELLVRLARQQRRVVR LKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQSCTFVTGHLQNDGRLDLDWAGLARGKQTLVFYMGLGNLAEIAARLVE HGLASDTPAALVSQGTQAGQQVTRGALAELPALARRYQLKPPTLIVVGQVVALFAERAMAHPSYLGAGSPVSREAVACA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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