Strain | Pseudomonas aeruginosa CF614 genomic scaffold adggb-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCAACTGCCACTCCCTGGCCATGGACCTGCAGGACCAGCACGCCTATATGCGCAAGACCGGGCAGTGGCGCTTCACCCCGCCGACCCATGTGGTCGCCG CCCTGCACGAAGCGCTCAGCCAGTACGAAGAGGAGGGCGGCCTGCCGGCGCGCCAGCGACGCTACGCGAGCAATTGCGAAACGCTGCTCGGCGAGATGGC CCGGCTCGGTTTCCGCAGCTTCCTGCCGGCGGAAATCCAGGCGCCGATCATCGTTACCTTCCACGCGCCGCGCGATCCGCGCTACCGCTTCGCCGACTTC TACCAACGCGTGCGGGAGAAGGGCTTCATCCTCTATCCGGGCAAGTTGACCCAGGTGGAAACCTTCCGCGTCGGCTGCATCGGCCACGTCGACGCCGCGG AGATGCGGCAGGCGGTCGCCGCCATCGGCGAGGCGCTGCGCGAACTGGAAGTCCTCGAGATCTGAACTGAACGACAACGAGCAGAAAAGGGTTCACGACA
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DNA Sequence for Gene |
>Q093_03840
ATGAATTACAACCAGCCAGCCACCCTCCAGGCCGCCATCCTCGACTGGGCGGGAACCGTGGTCGATTTCGGCTCCTTCGCGCCGACCCAGATCTTCGTCG AGGCTTTCGCCGAATTCGGCGTCCAGGTCAGCCTGGAGGAAGCGCGCGGTCCGATGGGAATGGGCAAGTGGGACCACATCCGCACCCTCTGCGACATCCC GGCGATCGCCGAGCGCTACCGCGCCGTCTTCGGCCGCCTGCCCAGCGACGACGATGTCACCGCCATCTACGAGCGCTTCATGCCGCTGCAGATCGAAAAG ATCGCCGAACATTCGGCGCTGATCCCCGGCGCCCTGCAGGCGATCGCCGAACTCCGCGGGATGGGCCTGAAGATCGGTTCCTGTTCCGGTTATCCGGCGG TGGTGATGGAGAAGGTGGTAGCCCTGGCCGAGACCAACGGTTACGTCGCCGACCACGTGGTGGCCACCGACGAAGTGCCCAACGGCCGGCCATGGCCGGC CCAGGCGCTGGCCAACGTGATCGCCCTGGGGATCGACGATGTGGCGGCCTGCGTGAAGGTCGACGACACCTGGCCGGGTATCCTCGAAGGGCGCCGCGCC GGGATGTGGACGGTGGCGCTGACCTGCTCGGGCAATGCCCTGGGCCTCACCTACGAGCAGTACAAGGCGCTGCCGGCGGCCGAACTGGAGCGCGAGCGGA CGCGTATCGAACAGATGTTCGAAGGTTCGCGTCCGCACTACCTGATCGAGACCATCGCCGAGCTGCCGGCGGTGGTCCGCGACATCAATGCGCGCCTGGC GCGCGGCGAGATGCCGCAGGGTAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCACGTCTGTGCCGAGGCCGCCGCGGGCAACCGCGGCGGCCTCGGTTTTCTAACCGGCGTCCGGGTGCCCCAGGCGAGTCTTGAGGAAGTCGATGAACG CGCGGACCTTCGACGGCAGGTGGCGGGTCGGCGGATAAACGGCATGCACGCCCTGGAGCGGAAACCCGTGGTCCGCCAGCAGGCGTTGCAGTGCGCCGCA GCGCAAGTCGGCCTGCACCAGCCAGTCCGGCAGCACGGCGATACCCAGGCCGTCGAGGGCAAAGGCGCGCAGGGCCGCGGCGTTGTCGGCCAGCAGCATG GGATGGCGCGGTCCGCGGTAGCTGCGCAGGGCGCCGTCGGGGGCGCGTACTTGCCAGGGCAGGGAGTCCGCCAGCCGGCTGTGACCGAGATTCTGCAGGC GCTCCAGACTCTCCAGGTCGGTCGGCGGCGGTTCGCCGAGCGCCGCCAGGCAGGCCGGGCTGGCCACCGCCAGGACCTCGAAGCTGGCCAGTTGCACCGC
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Amino Acid Sequence |
>phosphonoacetaldehyde hydrolase
MNYNQPATLQAAILDWAGTVVDFGSFAPTQIFVEAFAEFGVQVSLEEARGPMGMGKWDHIRTLCDIPAIAERYRAVFGRLPSDDDVTAIYERFMPLQIEK IAEHSALIPGALQAIAELRGMGLKIGSCSGYPAVVMEKVVALAETNGYVADHVVATDEVPNGRPWPAQALANVIALGIDDVAACVKVDDTWPGILEGRRA GMWTVALTCSGNALGLTYEQYKALPAAELERERTRIEQMFEGSRPHYLIETIAELPAVVRDINARLARGEMPQGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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