Strain | Pseudomonas aeruginosa CF614 genomic scaffold adggb-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGCGGCTGATCGCGCAGAAGTTCGACGGCGAGGAGTGGTTCCATTCGCGGCCTTCGGCGGGCGACTACGCCACCGTTTCCAGTGCCGCGAGCAACCTGG CGCCGAGCAACCCGGCACTGGCCGAGCGCATCGCCAGGGACGCCGCCCAGGAGCGTATCGCCGACCAGGGGCCGGTGCCGCTGGCGCTGGTCACTACCTC CGGTAGCGGACTCGATCCGCAGCTGCCGCCGCAGGCCGCGCGTTACCAGGCGCTGCGGGTGGCCACGGCGCGCGGGCTGCCGCTGCGGCTGGTGGAAGAC CTGGTGGAAAGCCACACCGAGCGGCCGCTGGTGGGGCCGGCGGTGGTCAACGTGCTGGCGCTGAACATGGCGCTGGCGGGGTTGAAGCGCTAGGTTTCCC CAGAGACCCACGCAAGGGCTTGCAATATCGCCGCATCGGCGGATGATCGCCGGCGATCGTCCGCCCTGCGCGGCGCAGAGCAACGGAGTACGACCGATCC
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DNA Sequence for Gene |
>Q093_03500
ATGACCGACACCGCACGCGCCGACGCGCTGCTGGCCGACCTGCCCGCTGACGGGCGCGGCCGCCTGAAAGTCTTTCTCGGCGCGGCGCCGGGGGTGGGCA AGACCTTCGCCATGCTGCAGGCCGCCCAGGCCCAGTTGCGCCAGGGCGTGAAACTGCGCGCCGGGGTGGTCGAGACCCACTCGCGGGCGGAAACCGAGTC CCTCCTCGCAGGCGTGCCGCAGCAGCCGCTGCGCAGCCTCGAATATCGAGGGATGAAACTGCAGGAAATGGACCTCGACGGTCTCCTCGCCGACCCGCCG GCGCTGGCCCTGGTCGACGAACTGGCCCACAGCAACGTTCCCGGCAGCCGCCACGCCAAGCGCTGGCAGGACATCCAGGAGTTGCTGGCGGCGGGAATCG ACGTCTACACAACGGTCAACGTCCAGCACCTGGAGAGCCTCAACGACCAGGTCCGCGACATCACCGGCGTGCAGGTCCGCGAGACGGTGCCGGACTGGGT GTTGCAGGAGGCCTACGAGATCGTCCTCATCGACCTGCCGCCGCGCGAGCTGCTGGAGCGCCTGCGCGAGGGCAAGGTCTACGTGCCGGAACAGGCGCGG GCGGCGATCGATGCGTTCTTCTCGCAGACCAACCTCACCGCGCTGCGTGAACTGGCGATGCAGACCGCCGCCGCGCGGGTCGACGCCGACCTCAACCACC GCTACCGCCAGCGCGGCGAGGAAGCGCCGGCGTTGCGCGGGCGGCTGCTGGTGGGCATCGACGGTGACGAACAGGCCGAACGCCTGGTGCGCCACGCCTG CCGGGTCGCCGAACGTCGGCACCTGCCCTGGAGCGTGGTACACGTCGATACCGGCGGCTTGCGCGGCGAGCAGGCGCGGATGCGCCTGCAGGGTGCGCAG CAACTGGCCGAGCGGCTCGGCGGCGAGATCGTCGTGCTGCGCGCCGGCGAGGTGGCGCGGACCCTCCTGCAACATGCCCGCGAGCGCCGCGCCAGCCTGG TCCTGGTTGGCCAGTCGCGGCGCCGCTGGTACCGCCGGGCCTTCGGCGGTGGTCTCGCCGGGCGTCTGCTGCGCGACGGCCAGGGCCTGGAGATCAGTGC CCTGGACAGCGAGGCCGACCTGCGCCCGGCGGAACCGCGGCCACGCTATCCGGTGGTGTGGAACGACTATCTGCTGGCGCTGCTGGCGACCGCCCTGGCC AGCGGCCTGGCCTGGATCGTGGCGCACCTGCTGGAGCTGCCGAACATCTCCCTGGTGTTCCTGATGGCGGTGCTGCTGGTGGCAGTGCGCAGCAGCCTGA TGCCGGCACTGCTGTGCGCGGTGGCGTCGTTCCTGGCCTATGACTTCCTGTTCATCCCGCCGCATTTTTCCTTCGCCATCCATCGCCACGAAGACCTGCT GAGCCTGGCGTTCTTCCTGTTCATGGCCGGCCTCACCGGCAACCTGGCGGCACGCCAGCGGCGCCAGCTGGAGGCGCTGCGCGATACCCAGGAGGAAACC AGCCTGCTGCTGGAGCTGTCGCGCAAGCTCACCGCCGCCACCGACCGCCAGGCGGTGCTGGCCGCCGCCGCCCAGCAGTTCGACGACTGGAAGGACGTCG AGGTCTGTCTGCTCGGTCAGGTCAATGGCGAGTGGAAGACCGAGGCCGGCGTGCAGCGGCAACTCGCCGACCAGGAACGGGTCGCCGCGGACTGGGCCTG GGCCCACGACCAGCCGGCCGGCCTCGGTACTGGCACGCTGCCCGGAGGACGCTGGTGGTGGTGGCCGCTGTCGGCGGAAGAGGGACCGCTGGCACTGCTC GGTGTCGCGCCGCTGGACGGCCAGCCGCTGAGCCCGCAGCGCCGGCGCCTGCTCGCCGCCCTCGGCCAGCCTCTGGCCCAGGCCCTGGCGCGGGCTCGCC TGGCCGAGGACCTGGAGGCCGCGCGCCTGCACGGCGAGACCGAGCAACTGCGCAGCGCCTTGCTCGCCTCGGTCTCCCACGACCTGCGCACGCCGCTGAC GGCCATGCGCGGCTCCATCGACAGCCTGCTGGCGCTGGGTGAGGCGATCCCGCCGGCGGATCGTCGCGAACTGCTGGAAAGCACCCGCGACGAGGCCGAA CGACTGGACCGCTATATCCAGAACCTGCTCGACATGACCCGTCTCGGCCACGGTGGCCTGAAGCTGGCGCGCGACTGGGTGGCGCCGGGCGACATCGTCG GCAGCGCGCTGAACCGCCTGCGCGCGGTGCTGGCGCCGTACCGGGTGCAGGCGATCGTGGCCAACGACCTGCCGTTGCTCTACGTGCATGCGGCGCTGAT CGAGCAGGCGCTGATCAACGTGCTGGAAAATGCCGCGCGCTTCTCGCCGAACCACGGCCGGTTGCGCATCGAGGTCAGCCAGGATGCCGCCGAGCTGCGT TTCGCGGTGAGCGACGAGGGGCCGGGGATTCCCGAGGCCGAGCGGGAGAAGATCTTCGACATGTTCTACACCGCTGCCCGTGGCGACCGCGGTGGCCAGG GCACCGGCCTGGGCCTGGCGATCTGCCAGGGCATGATCGGCGCCCACGGCGGGCGTATTAGCGTCGGCGAAGGCCTCGACGGTCGCGGCACCACGCTGGT CCTGCACCTGCCGCTGCATCCGCAGCCGGACCTCGGGCAACTGGAGGGCGACGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCGGCGCACTTGCCTGGCGCCTGCGCTCGCGCTATTCCTGCCGTTTCCGCGACGCCGCCGCTGGCCTGTCGCCGTGTTCACCTGCCGTGCCGAGTGCC ATGACCCAATTGCAGAACAGCATCCTGCTGATCGACGACGAACCGCAGATCCGCAAGTTCCTCCGTATCAGCCTCAATGCCCAGGGCTACCGGGTGCTCG AGGCCGGCACCGGCGAAGAGGGGCTGGCCCAGGCCGCGCTGAACCGACCGGACCTGGTGGTGCTCGACCTCGGCCTGCCGGACCGCGACGGCCAGGACAT CCTTCGCGACCTGCGCGAATGGTCGCAGGTGCCGGTGCTGGTGCTGTCGGTGCGCGCCAGCGAGGGCGAGAAGGTACTGGCCCTGGACGGCGGCGCCAAC GACTACGTGACCAAGCCGTTCGGCATCCAGGAGTTCCTCGCCCGCGTGCGCGTCCTGCTGCGCCAGGCGGCGCAGGGCGAAAGCCCGGAGGCGTCGGTGG
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Amino Acid Sequence |
>histidine kinase
MTDTARADALLADLPADGRGRLKVFLGAAPGVGKTFAMLQAAQAQLRQGVKLRAGVVETHSRAETESLLAGVPQQPLRSLEYRGMKLQEMDLDGLLADPP ALALVDELAHSNVPGSRHAKRWQDIQELLAAGIDVYTTVNVQHLESLNDQVRDITGVQVRETVPDWVLQEAYEIVLIDLPPRELLERLREGKVYVPEQAR AAIDAFFSQTNLTALRELAMQTAAARVDADLNHRYRQRGEEAPALRGRLLVGIDGDEQAERLVRHACRVAERRHLPWSVVHVDTGGLRGEQARMRLQGAQ QLAERLGGEIVVLRAGEVARTLLQHARERRASLVLVGQSRRRWYRRAFGGGLAGRLLRDGQGLEISALDSEADLRPAEPRPRYPVVWNDYLLALLATALA SGLAWIVAHLLELPNISLVFLMAVLLVAVRSSLMPALLCAVASFLAYDFLFIPPHFSFAIHRHEDLLSLAFFLFMAGLTGNLAARQRRQLEALRDTQEET SLLLELSRKLTAATDRQAVLAAAAQQFDDWKDVEVCLLGQVNGEWKTEAGVQRQLADQERVAADWAWAHDQPAGLGTGTLPGGRWWWWPLSAEEGPLALL GVAPLDGQPLSPQRRRLLAALGQPLAQALARARLAEDLEAARLHGETEQLRSALLASVSHDLRTPLTAMRGSIDSLLALGEAIPPADRRELLESTRDEAE RLDRYIQNLLDMTRLGHGGLKLARDWVAPGDIVGSALNRLRAVLAPYRVQAIVANDLPLLYVHAALIEQALINVLENAARFSPNHGRLRIEVSQDAAELR FAVSDEGPGIPEAEREKIFDMFYTAARGDRGGQGTGLGLAICQGMIGAHGGRISVGEGLDGRGTTLVLHLPLHPQPDLGQLEGDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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