Pseudomonas aeruginosa PAO1, PA0336 (rppH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Sequence Data

Strain Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CTCGGCGAGCAGCGCCTCGCCCTTGGCCAGCACGATCGGCTCGATCACTTCCTGCATGAACTGGCGGTGCCAGGTTTCCAGCTGGGCCATCTCGGTGCGA CCGAGGATCGCCTGGGTGAAGGCCTGGTAGGCAAGGACGTCGAGCTTGCCGGCGACGTAGTCGGCATAGAAGGCGTCGTTGCGCGCCTGGTATTCGGCGG CGTCGACCAGGCCGCGCTGGCACAGCCATTCGCCCCAGCTATGGTCGCTGTCGCCGGCGAGCAGGGTGTTATCGAGATCGAAAAGGGCCAGACGCACGGG GTGACTCCATCGGTTGGCGGGTGGCGGAAGGGCCGCGAGAGCCTTTTGCGAAGGCTCCCACCGGGCCTTGGGAAAGCCCCTAGCCTACCGGCTTTTGCCG GCCCTGTATCCTCCCCGCACGAGTCGCAAAGCCGCGCGTTGCCGCTATCACAAGCTTTATGGAACAATGCGGGCACATGCGATTTCGAGGATGTCCCAGC
DNA Sequence for Gene
>PA0336 |rppH
GTGATCGATTCCGATGGTTTTCGCCCGAATGTCGGCATCATTCTCGCCAACGAGGCGGGGCAGGTGCTGTGGGCGCGGCGTATCAATCAGGAAGCCTGGC AGTTCCCGCAGGGAGGCATCAATGATCGCGAAACGCCGGAAGAGGCGCTGTATCGCGAGTTGAACGAAGAAGTCGGGCTGGAGGCCGGGGACGTGCGCAT CCTGGCCTGCACCCGCGGCTGGCTGCGCTACCGTTTGCCGCAGCGCCTGGTGCGGACCCACAGCCAGCCGCTGTGCATCGGCCAGAAGCAGAAATGGTTC CTGCTGCGGCTGATGTCCGACGAGGCGCGCGTGCGCATGGATATCACCAGCAAGCCCGAGTTCGACGGCTGGCGCTGGGTGAGTTACTGGTACCCCCTGG GACAGGTGGTGACCTTCAAGCGCGAGGTCTACCGCCGCGCCCTGAAGGAACTGGCCCCGCGCCTTCTGGCGCGGGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACACGGAGACAAGGCCCCGAGCATGCTCAACACGCTGCGCAAGATCGTCCAGGAAGTGAACTCCGCCAAGGATCTGAAGGCGGCGCTGGGCATCATCGTG CAGCGGGTCAAGGAAGCCATGGGTACCCAGGTCTGCTCGGTGTACCTGCTCGACACCGAGACCCAGCGTTTCGTCCTGATGGCCACCGAAGGCCTCAACA AGCGTTCCATCGGCAAGGTCAGCATGGCTCCCAGCGAAGGCCTGGTCGGCCTGGTCGGCACCCGCGAGGAGCCGCTCAACCTGGAGAACGCCGCCGCCCA CCCGCGCTACCGCTATTTCGCCGAGACCGGCGAGGAGCGCTACGCGTCGTTCCTCGGCGCGCCGATCATCCACCATCGGCGGGTGATGGGGGTGCTGGTG GTGCAGCAGAAGGAGCGCCGCCAGTTCGACGAAGGCGAGGAAGCCTTCCTCGTCACCATGAGCGCCCAGCTCGCCGGGGTCATCGCGCATGCCGAGGCGA
Amino Acid Sequence
>RNA pyrophosphohydrolase, RppH
MIDSDGFRPNVGIILANEAGQVLWARRINQEAWQFPQGGINDRETPEEALYRELNEEVGLEAGDVRILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWF LLRLMSDEARVRMDITSKPEFDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site