Strain | Pseudomonas aeruginosa PAK genomic scaffold acUKM-supercont-complete, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGCGACATAATTTTTTCGTTTCTTAGAACCGTCCCTGGCTCGGCTCGCTCCACGACCGAACACGACATGCCGGCATGCCAGCGTTAATACTTTGGTATT AGGCCCTTGGTATTAACGTTAAATAACCGGTAAATATCCGGATTTTCTTTTCGTCGAATTTACGAGCAATATGAAACATATTTCGTTGAAATAAGCTCTT CTTTCACATAATTATAAAAATATCCTGAAACAGAGCCGTCATCCCTCACCTCCAAAACGACGACTCCCCGTGCCGTGCGCCCGCCGCGCAGAAAGCGAGC CGGCGGCCGATTCCACCCTCGCACGCCAGCCCTTGCGCTTCACTGACCGACGGGAGGTTTCCCCGATGAAAACGTCATCCAGAAGACAAGTTGAAACACT CGGGCGCTATCTATCGAGTCCTCGACGCTTCTTCCACAGTAGCGGCAACCTGACCCGATCAAGGGAAGCGGCACGCGCCACCCAATAAAAGGAATAAGGG
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DNA Sequence for Gene |
>PAK_04383
ATGCCTATTCATAACCTGAATCACGTGAACATGTTCCTCCAGGTCATCGCCTCCGGTTCGATTTCCTCCGCTGCGCGGATCCTGCGCGAGTCGCACACCG CGGTCAGCTCGGCGGTCAGCAACCTGGAAATCGACCTGTGCGTGGAGCTGGTCCGTCGGGACGGCTACAAGGTCGAACCCACCGAGCAGGCGCTTCGCCT GATCCCTTACATGCGCAGCCTGCTGAACTACCAGCAGCTGATCGGCGACATCGCCTTCAATCTCAACAAGGGTCCGCGCAATCTCCGGGTGTTGCTGGAC ACCGCCATCCCGCCGTCGTTCTGCGATACGGTGAGCAGCGTACTGCTCGACGATTTCAACATGGTCAGCCTGATACGCACCTCGCCCGCCGATAGCCTGG CGACGATCAAGCAGGACAACGCGGAAATCGATATCGCCATCACCATCGACGAGGAACTGAAGATCTCCCGCTTCAACCAGTGCGTGCTCGGCTACACCAA GGCGTTCGTCGTCGCCCATCCGCAGCACCCGTTGTGCAATGCCTCCCTGCACAGCATCGCGAGCCTGGCCAATTACCGGCAGATCAGCCTCGGCAGCCGC TCCGGGCAGCATTCGAACCTGCTGCGGCCGGTCAGCGACAAGGTGCTCTTCGTGGAAAACTTCGACGACATGCTGCGTCTGGTGGAAGCCGGCGTCGGAT GGGGCATCGCGCCGCATTATTTCGTCGAGGAACGCCTGCGCAACGGTACCCTGGCAGTCCTCAGCGAACTCTACGAACCGGGCGGCATCGACACCAAGGT GTATTGCTACTACAACACCGCGCTGGAATCCGAGCGCAGCTTCCTGCGCTTTCTCGAAAGCGCCCGCCAGCGCCTGCGCGAACTCGGCCGCCAGCGTTTC GACGATGCGCCGGCCTGGCAACCGAGCATCGTCGAAACGGCGCAGCGCCGCTCAGGCCCGAAGGCGCTCGCGTACCGCCAGCGCGCCGCACCAGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCGTTCTCCAGCAGACGCTGGCCGTGGGTGGTGAGAATCGACTCGGGATGGAACTGCAAGCCCAGCTGTCGATTGCGCGGATCGGCCATCGCCATGATC TCGCCATCGGCATCGGCCAGGCAGTCGAAACCTTCCGGCAGGCGACTGACCACCAGCGAGTGGTAGCGCGCGACGCGCAGGTCAGCGATGCCGTCGAACA GCGGGTGACGCTGATCGAAACGCAGGGACGTGCTCTTGCCGTGCAGCGGCTTCCTCGCCTCGCCCACCGCGCCACCGGCGGCCAGCGCCAGCGCCTGGTG GCCGAGGCAGACGCCGAGCACCGGCAAGCGCCCGCGGGCCCAGGCGAGCAATTCCAGCATGCGGCCGGCGTCTTCCGGCCGACCGGGCCCCGGCGACAGC ACCAGCAGTTCGCAACCGTCGGCCAGCAATGCCGCCTGGATCGTCGGCAACGGCGTATCGTTGCGCATCACCCGGACCTCCGCGCCGAGCAGGCAGAACT
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Amino Acid Sequence |
>transcriptional regulator MvfR
MPIHNLNHVNMFLQVIASGSISSAARILRESHTAVSSAVSNLEIDLCVELVRRDGYKVEPTEQALRLIPYMRSLLNYQQLIGDIAFNLNKGPRNLRVLLD TAIPPSFCDTVSSVLLDDFNMVSLIRTSPADSLATIKQDNAEIDIAITIDEELKISRFNQCVLGYTKAFVVAHPQHPLCNASLHSIASLANYRQISLGSR SGQHSNLLRPVSDKVLFVENFDDMLRLVEAGVGWGIAPHYFVEERLRNGTLAVLSELYEPGGIDTKVYCYYNTALESERSFLRFLESARQRLRELGRQRF DDAPAWQPSIVETAQRRSGPKALAYRQRAAPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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