Strain | Pseudomonas aeruginosa PAK genomic scaffold acUKM-supercont-complete, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCATCGAGGTGCAGTCCGGCAGCTACCTCGGCGAGGACGACATCGAGCGCCTGGAAGACGTCTACGGGCGCACCGCAGAACCGGCCCTGCAAGTGGTCGC CGGCAGCCGCTGAAGCGTCGACCCGGCCCCCTGGCGGAGCGATCCGCCAGGGGGCTGTTTTTTTCCGACAACCTACGGGATTGACTTTCCCTGGCCCTCC CCATGTTTCCATGAAGTTTCCGGAATATTCACGGGGAGCGGACATCAAGTATTAATGAACCCTTAAAGAAACAGGACTCGGGTTATTAATAAAGGCCACT CAGAAAACACCCGAGATCCATTCCAACCAACCCTGCAAGCCCCTGAAAACGAGGCTTCCGGCTTTATCCTCCAGTTTCTTCGAGTTCGTTCAGTCTTCAT TCAGCCGTTGTTAAGCGAGTCTTAACAAACGTTCAGGCAGCATTCAGCGACATATAAATAACCTCTTCGTACCGCCCTCCCAGTACCGAGGCTTCATTAC
|
|
DNA Sequence for Gene |
>PAK_01636
ATGTCACTGGACTTTCTGCCATTCTCCCGGCCAAGCATCGGCGAGGACGAAATCGCCGCCGTGGAGCAGGTCCTGCGTTCCGGCTGGATCACCACCGGGC CGAAGAACCAGGAGCTCGAACAGCGCTTCGCCGAACGCCTCGGCTGCCGCCACGCGGTGGCGCTATCCTCGGCCACCGGCGCCCTGCACGTCACCCTGCT GGCGCTGGGCATCGGCCCCGGCGACGAAGTGATCACGCCGTCGCTGACCTGGGTCTCCACCGCCAACGTCATCACCCTGCTCGGCGCCACCCCGGTGTTC GTCGACGTCGACCGCGACACCCTGATGTGTTCGGCGCAGGCAGTGGAAGCCGCCATCGGCCCGCGCACCCGCGCCATCGTGCCGGTGCACTACGCCGGCT CCACCCTGGATCTCGAAGGCCTGCGCACGGTCGCCGGGCGCCACGGCATCGCCCTGGTCGAGGACGCCGCCCACGCGGTCGGCAGCGAATACCGCGGGCG CCCGGTAGGCTCCCGCGGCACGGCGATCTTTTCCTTCCACGCGATCAAGAACCTGACCTGCGCCGAAGGCGCGATGTTCGTCAGCGACGACAGTGCCCTC GCCGAACGGGTCCGCCGCCTCAAGTTCCACGGCCTCGGGGTCGATGCCTACGACCGCCTGAGCCATGGACGCAAGCCGCAGGCGGAAGTGATCGAGCCCG GTTTCAAATACAACCTGGCCGACCTCAACGCCGCCCTCGCGCTGGTCCAGCTCAAGCGCCTGGACGCGCTCAACGCGCGCCGCCAGGCCCTCGCCGAACG CTACCTGGAGCGCCTCGCCGGCCTGCCGCTGGCGCCGCTCGGCCTGCCCGCGCACAAGCAGCGCCACGCCTGGCACCTGTTCATCCTGCGCATCGACGCC GAGGCCTGCGGCCTGGGCCGCGACGCCTTCATGGAAGCCCTGAAGGCGCGCGGCATCGGTAGCGGCATCCATTTCATCGCCAGTCACCTGCACCACTACT ACCGCCAGCGCCAGCCGCGCCTGAGCCTGCCCAACAGTGAGTGGAACTCGGCCCGCCTGTGCTCCATCCCGCTGTTCCCCGACATGCGCGACGACGACAT CGAGCGCGTCGCCCGCGCCATCGAGGAGATCCTGGAGAAACGTCGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AGCCCTATCCGATCGACCTGGTCTCGGTGGTGATCCCGGTCTACAACGAGGAAGCCAGCCTGCCCGAACTGCTGCGCCGCACCGAGGCCGCCTGCCTGGA GCTGGGCCGCGCCTTCGAGATCGTGCTGGTCGACGACGGCAGCCGCGACCGCTCCGCGGAACTCTTGCAGGCCGCCGCCGAACGCGACGGCAGCGCCGTG GTGGCGGTGATCCTCAACCGCAACTACGGCCAGCACGCGGCGATCCTCGCCGGCTTCGAACAGTCCCGTGGCGACCTGGTGATCACCCTCGATGCCGACC TGCAGAACCCGCCGGAGGAAATCCCGCGCCTGGTGGAGCGCGCCGCGCAGGGCTATGACGTGGTCGGCAGCATCCGCGCCGAGCGCCAGGACTCGGCCTG GCGGCGCTGGCCTTCGCGCCTGGTGAATCTGGCGGTGCAGCGCTCCACCGGGGTCGCCATGCACGACTACGGCTGCATGCTGCGCGCCTACCGGCGCAGC
|
|
Amino Acid Sequence |
>UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
MSLDFLPFSRPSIGEDEIAAVEQVLRSGWITTGPKNQELEQRFAERLGCRHAVALSSATGALHVTLLALGIGPGDEVITPSLTWVSTANVITLLGATPVF VDVDRDTLMCSAQAVEAAIGPRTRAIVPVHYAGSTLDLEGLRTVAGRHGIALVEDAAHAVGSEYRGRPVGSRGTAIFSFHAIKNLTCAEGAMFVSDDSAL AERVRRLKFHGLGVDAYDRLSHGRKPQAEVIEPGFKYNLADLNAALALVQLKRLDALNARRQALAERYLERLAGLPLAPLGLPAHKQRHAWHLFILRIDA EACGLGRDAFMEALKARGIGSGIHFIASHLHHYYRQRQPRLSLPNSEWNSARLCSIPLFPDMRDDDIERVARAIEEILEKRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|