Pseudomonas sp. MOIL14HWK12:I1, PSEK12I1_RS0122025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I1 PseK12I1DRAFT_scaffold_4.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGTTTTCGATGGCCATCAGTACCGCCGAAGCTCTGGCCCGGCAGCCACGCCCCCTGACGTTCGCCCTGACCGGTACCGACATCAGCAGCGAAGCCCTGC GCCAGGCGCGGCAGGGGACCTACAGCCTGCAGCGGCTGGCTGGGGTGCCGGCCAGCCTGCGCGAGCGCTATTTCCGCACCCATGCGGACGGCAGTTTCGA GGTCACCGCGGGCCTGGCGGAGCGACTGTGCTTCGCCCGACTCAATGTGCTGGAACTGGGGCAGGCCCCCTTGCAGGGGCTCAATGTCATTTTTTGTCAG AACTTGCTGATTTATTTCCGCCGCTGGCTGCGTCGAGACCTGCTCAACCAGCTGGTCCAGCGGCTTGCACCGGGTGGGCTCTTGGTCCTGGGTGTCGGTG AGGTGAGCAATTGGAGCCACCCGCAACTGGTACCCGTCGATCATCCCGAAGTCCTGGCGTTCACCCGCCAGGTAAGCCCCCCGGCATGACAGGAGCCGAG
|
|
| DNA Sequence for Gene |
>PSEK12I1_RS0122025
ATGATCGATCGACACGACTACGTAGCCCTCGAGTGGGTCAAGGGAGAGATCGCCGAAACCTTGCAGCAGGCCCGCAAGGCGCTCGAGGCGTTCGTCGACA ACCCGCACGACCGTAGCCGCCTGGGTTTCTGCCGGACCTATGTGCACCAAGTCTACGGCACCCTGCAGATGGTGGAGTTCTATGGCGCCGCGCTGCTCGC CGAAGAGATGGAGCTGCTGCTGCAGGCCCTTCACGAAGAGCGGGTGAACAGCTCGGACGAGGCGCTGGAAGTCCTGATGCAGGCCATCTTGCAGGTGCCG CCCTATCTGGACCGGGTCCTCGAGGCCCGCCGCGATCTGCCCCTGGCCATCCTGCCGCTGCTCAACGATCTGCGCTCGGCGCGCGGGGAAAAGCTGCTCT CGGAAACCAGCTTGTTCTCGCCGGATCTGTCCGCCACGCCGCTGTCGCTGAGCGATGCCGAACTGGCCGACCGCGCGGCGCCGGACTGGCTGCCACGCCT GCGCAAGCTGCGCCAGGCGCTGCAGGGCGCCCAGGTCGGACTGTTCCGCGACCGCGACGTCCAGCTGCACCTGGACTATCTGCTGCGGGTCTTCGAGCGG CTGGATCAGCTCTGCGCCGGCTCGCCCTTTGGCGCGCTCTGGCCGGTGGCGGCGGGTCTGACCGAGCTGTTGCAGGCCGGCGAGCTGGACAACAGCAGCT CGATCCGCGGTCTGCTCCGGCAACTGGATCGTGAACTCAAGCGACTCATCAGCGATGGGGTGACCACCCTCAACCAGCCGGCGCCGGCCGATCTGCTGAA GAATCTGCTGTTCTACCTGGCCAAGGCGCCGGTGCAGAGTCCGCGCATCGCCGCGCTCAAGGCGCACTATCGTCTCGACGAGGCCCTGCCGGATGCCGAG CTGGTGGGCTTCGAGCGTTCGCGCATCGTCGGTCCGGATCGCGAAGCCATGCGCTCGGTGGTGACCGCGCTGTGCGAAGAGCTGGTACAGATCAAGGACA GCCTGGACCTTTTCGTGCGCAGCGATCGCCAGCAGCCTGCCAGCCTGCGCGGCCTCCTGGCGCCGCTCAAGCAGATCGCCGATACCCTGGCGGTGCTGGG CTTCGGGCAGCCGCGCAAGGTGGTGCTGGAACAGCACGAAGCCGTGGCCGAACTGGCCGAAGGCGTGCGCGAGGCCAGCGACGCCGCCCTCATGGATATC GCCGGGGCGCTGCTCTATGTCGAAGCCACCCTGGCCGGCATGGTCAGTGGCAACGAGGTCGGCGATGCCGAGGAGAGCCGGCTGCCCACCACCGATATCG ATCAGCTGCATCGGGTGGTGGTGCGCGAGGCGCGCAACGGCCTGGAGCAATCCAAGGACGCCATTATCGAGTTCATCGCCTCCCAGTGGAACCATGTCCA CCTGGAGTCGGTGCCCCTGCTGCTGACCCAGGTCCGTGGCGGCCTGGCGATGATTCCGCTGGAACGGGCCGCGGCCCAGGTCCAGGCGGCCAACGACTAC ATCTGCCAGCAGCTGCTGGGCAAGCAGGCCGTGCCCGACTGGCAGAGTCTGGACACCCTGGCCGACGCCATCACCAGCGTCGAGTACTACCTGGAGCGCC TGGCGGAAGACCCGTCCACGCCCCACGACATGATTCTCGACATCGCCGACGAAAGCCTCATCGCCCTCGGCTATCCGCCCAGGGCGGCCGGCGAAGGCGA GGCGGCGGCCGCGCCCCTGGCCTCCGGCGAGGTCGAGCCGCCGGCTCAGGAGCTGCCCGAAGAATTGCCATCGCCGGCGGAGCCGGTGGCCGAAGAGGCG CTGGAACCTACCGCCCTGCCGGTCGAGGAGCCTGCGGACGCCGACGAAGAATTCCTGATCGAATTCGAGCCTGCCGCAGCGCAGGAGCCTCCAACCTCCG CGACCCAGGCCGACGAGCAGGACGCGGCCGCGGTGAGCGATGAAGCGCCGCAGGCCGAGGCCGAGCCGGAGGGTGCAGAGCCCGAGGAGTTGCTGGCCGG CATCGAGCTGGACAGCCTGCCGCCGCCGACCCCCGATGCCGAGGCGATCGCCGAGGTGCTGGCGACGCCGGTCAACCCCATCAATCCTCCGGCGGCGCAG GTGCCGCAGGCGCTGCTGCCGCCCGCGGCCGATGCCGAGCCGGTCGAGGAGGAGCTGCGCGAGGTCTTTATCGAAGAGGCCGGCGAGGTCCAGGCCGAAC TGGAGCGCTGGCTGCCGACCTGGCAGGCCGAGCCCGAGCAGCGCACCGCGCTAAGTGAATTGCGGCGCAACTTCCACACCCTCAAGGGCAGTGGCCGCAT GGTCCAGGCGCTGGTCATCGGCGAACTGGCCTGGGCGCTGGAGAATCTGTTCAATCGCCGGCTGGATCACAGTGTCGCGCACAGCGCTGCCGTGCAGACG GTGGTCGAGCAGACCTGCGCGCTGCTGCCGGAGCTGGTCGCGGAATACGCCGAGGATCGTCAACGGCAACGTGACGACGTCGACTGGCTGGCCCACGCGG CCCATGCGCTGGCCCGCAACGAAGCCCTGCCTGAGCGAGCGCCGGCCGGTAGCGCGGCCCCGTCCGCGGCAGCTGCGTTGCCCGTGGCAGAACTCGTCGA ATCCGCGATTCCTGCACCTGCCGCCGCCGAGGCCGATACCCAGCTGCTGGATATCTTCCGCACCGAAGCCCAGGCGCACTTGGAAACCGTGCGCCGTTTC CTCGAGTCGGCCGACGCCGGCAGTGCCCAGCCGGTCTCCGACAATCTCCTGCGCGCCCTGCACACCCTCAAGGGCAGTGCCCATATGGCGGGCAGTTCGC CGATGGCCGAACTGGCGTCGGCGCTGGAGCGGCTGGCCAAGGAATACAAGCTCGCCCATGTCGCCTTCGCCGAACCCGAGTGCGGCCTGCTCGCCCAGGG CGCCGAGTTGCTGGAGCAGCGACTGGCCGAACTCGACGAAGGGTCGCTGGCGACCCCGCTGGCGGGTGCGGCGGAAGTTATCGCGCGCTGCGAAGGGCTG CTGGAGGAGCTGAATCCCCAGCTGCCGATCCCCGCGGCGCCGCTGCCGGAGCAGCGTGACGTCCTGCGCCTGACCGATTTCCTGATGCCGGCCATGGATC TGCTGCTGGAAGCCGACGAGCGCCTGCATGCCTGGCGCACCGATGGTGATCTGGCTGCCTGCCCGGATCTGCTGGCCGAACGCCTGAACACCTTTGCCGA CGGGGCCGCCCGGGTCGGGTTGGCCGATGTCGAGCAACTGGCCGAAGCCCTGCAGGTGGTCTATGCCGCCGCGGCGAGCGGTTCGCTGCCCGCCGATGCG GCCTTCTTCCGCGAGGCGGAAGAGGCCCAGGAAGCCCTGATCAGCATGCTCAATCAGCTGGCCGGTGGCATGCGGGCGACGCCCAGCGAGGAACGCATCC AGGGCCTGCGCGGCCTGCTGGCCGGCATTCTCGCCGGGTTGCCCATGGCGGACACCAGCCTGCTGGCCGAGCCCGAACCCGAAGAGCTCTTCGATCCGGC AACGGCCACGCCGGTGGCACCTGAGCTGGCGCTGGACGTCGAACTACCCGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCC GAAGCCGAGCCTGACCTCAAGCTGCCGGAAGAGCCGCAAGAGCCGCAAGAGCCGCAAGAGCCGCAAGAGCCGCAGCCGCTGGTAGCAGACAGCGAGCCGG TGGCGGTCGAGCCCGAGGCTGCCGAGCCCGTCGATCCGGAAATGCAGCTGATCTTCCTTGAAGAGGCCCAGGATCTGCTGGACAGCGCCGACCGGGCGCT GAAACGCTGGCTGGTGGAGCCGCAGCAGCGCTTCCACCTCGGCACCCTGCAGCGCGATCTGCATACCCTCAAGGGCGGCGCCCACCTCGCCGGGGTGGCG CCGGTCGCGCACCTGGCCACGGAGCTGGACGCCATCTACGAAGGCCTGCTCGACGGCCGTCTCGCCGGCGGTGCCGAACTGGCCCAGCCCCTGCGCGATG CCCATGGCTGCCTGGCGGCGCAACTCGAAGAGCTGGCGGCGGGGGAGCCGGTCAGCGAGCATGCCGACCAGGTCGAGCGCCTGCAGCGGATCCGTAGCGG TCATCTCGATGACCTGCCGGCGCTGGACGACAGCGGATCGGCCCCGGGCGAGCCCGCGCTCGGCGAATCGCTCGCGGACCACCCGGCGGACGCCGAGTCC GCGCTCCTGGAGCCGGTGCCCATGGCGGCCGCGCCGGCGGCGGAAGGTCCCGACGCCGAGTTGCTGGCCATCTACATCGAAGAGAGTCGCGACCTGCTCG ACAGCATGGCGACCTCGCTGCGCGCCTGGGAAGCCGAGCCGCACAACAGTCTCGAACTGGAATCCCTGCTGCGCGACCTGCACACCCTCAAGGGCGGTGC GCGGCTGGCCGAGGTGGATGCCATCGGCGATCTCGCCCATGCCCTGGAGGCCTTCTACGAAGGACTGGCGCGCGGACGGATCAAGCCCGGCGCGGACCTG GGCGACCTGCTGCAGCGCTGCCATGACCGCCTGCACGAGCAACTCGAAGCCCTAGCCCGGGGCGAGACCCCGGTCCCGGCCGCCGATCTCATCGCGGCCT TGCGCGACTACCGCGGCGAGCCACTGGCGACCGGCGTGACTGCCGCGGCCGTGGTGGCGGCACCGGTCTTCGATGCCGACACCGATGCGGAAATCCTCGA GATCTTCATCGAGGAAGCCCAGGATCTGCTGGTCAGCATGGACGAGGCCCTGGCGGACTGGTCGGCCGCGCCCGATGTGGCGGTGGACGAATTGCTGCGC TGCCTGCATACCCTCAAGGGTGGCGCGCGCCTGGCCGGTCTGCACGGCCTGGGCGAGCAGGCCCATGAACTGGAACAGCAACTGGCGGAATTGCGCTCGC TCGCCGTGGGGCTGAGCGAGGGCGACCGCGAGCGGGTACGCGCCCTGGCGACCCAGGGCGTCGACGGGCTGCAACTGGCGGTCGCCCAGCTGTCGCTGCC GGCCGCCGCCCAGGCGAATGCGGCGGCCGAGCCGGTCGAGACGCCCGAGGCCGAACCGGACGTCGTGCGCGAGGCTGAGCAGCCACCGGTCGCGGACGTC GCCGAGGAGGAAGCGCCTGCCGACCCGGACGTCGAGCCCGCCGTCGAGGGCCTGCCTGTTGCCCTGCCTGAGCAAGACAGCGCGGCGGCCCCCGTCATGG TCGCGGTCGAGACACCCGCGGCCCCAGTGGCGCCACTGCCCTTCGTGCAACGCCTGCAGCAGGTCCGTCAGCAGGCGGCGCAGCGGCGTTCGTCCCAGGA GCTGGTGCGGGTACCGGCCGCGCTGCTGGAGCAGCTGGTCAACCTGGCCGGCGAGACCTCGATCTTCCGCGGTCGCGTCGAACAGCAGGTCAGCGACATC GGCACCACCCTCGGCGAGATGGAAGCCACCATCGAGCGGGTGCGCGATCAGCTGCGCCGGCTGGATACCGAGACCCAGGCGCAGATCATCAGTCGTCACC ACGAAGACGTGGATCGCGCCGGCTACGAGGATTTCGACCCCCTGGAGCTGGATCGCTATTCCCAGCTGCAGCAGCTGTCCCGCGCCCTGTTCGAATCGGC GTCCGACCTCCTGGATCTGAAGAACACCCTGGGCCAGCGCAATCGCGATGCCGAGACCCTGCTGCTGCAACAGGCGCGGGTCAACACCGAGCTGCAGGAA AGCCTCATGCAGACGCGCATGGTGCCTTTCGAGCGCATGGTGCCGCGCCTGCACCGGGTGGTACGCCAGGTCAGCGCCGAACTGGACAAGCCGATCGAGC TCAGGGTCGGCAACGCCGAAGGCGAGCTGGACCGCACGGTGCTCGAGCGGATCATTCCGCCGCTGGAGCACATGCTGCGCAACGCCATCGACCACGGCGT CGAGGACGCCGCCGGACGCCAGCGCGCCGGTAAGCCGGCCGAAGGCGTGATCAGCCTGGATCTGCGCCGCGAAGGTGGCGACATCATTCTGACCCTGGCC GACGACGGCCGTGGCATCGACCTGGCCGCGGTACGCCGCAAGGCCATCGAGCGCGGCCTGATGGCGGAAGACGCGCAGCTCGCCGATGAGGAGCTGCTGC AATTCATCCTCGAATCGGGCTTCTCCACCGCGCCGACCGTCACCCAGATCTCCGGGCGGGGTGTGGGCATGGACGTGGTGCACCAGGAGGTGAAGCAGCT CGGCGGCAACATGGACATCCACAGCGTGGCGGGCGAGGGGACGCGCTTCACCATTCGCCTGCCGTTCACCGTGTCGGTGAACCGCGCGCTCATGGTGCAT GCCGGCGACGACCTCTATGCCGTGCCGCTCAACACCATCGAAGGCATCGTGCGGGTGACCGCGGCCGATCTCGAACGCTATTACCGTCCGGGGGCGGGCA CCTTCGAATACGGCGGCCAGCACTATGACCTGCGCTACCTGGGGCACCTGCTCGGCAATGGCCAGCAGCCCAAGCTGAGCGGCCAGAGTCTGCCGCTGCC GGTGGTGCTGGTGCGCGCCGCCGAATACGCGGTGGCGGTACAGGTGGATGCGGTGGCCGGTTCGCGGGAGATCGTGGTGAAGAGCCTGGGTCCGCAATTC GCCGGGGTGCCGGGTCTGTCCGGTGCCACCCTGCTGGGGGACGGGCGCGTGGTGGTGATTCTCGACCTGCTGGCGATGATCCGCAGTCAGCGCGCCAGTG GCGAAGAGCTGGCGCGGCTGGCGCAGGGTCCGGCCACTGTGGCCGAGGTCACCCGACCGGCGCTGGTCATGGTGGTCGACGATTCGGTCACGGTGCGCAA GGTCACCAGCCGCCTGCTGGAACGCCACGGCATGGAGGTCTTCACCGCCAAGGATGGAGTGGACGCCATCGCCCAGTTGCAGGAGCGGCAGCCGGACATC CTGCTGCTGGACATCGAGATGCCGCGCATGGACGGCTTCGAGGTGGCGACCCTGGTCCGCCACGATGCGCGCCTCAAGGACCTGCCGATCGTGATGATCA CCTCCCGTACCGGGGAAAAACACCGCGAGCGGGCGCTGAGCCTGGGCGTGAACGAATACCTGGGCAAGCCCTACCAGGAGAGCGAACTCCTGGCCCACAT CCATCGGTTGGTCAGGGAACATGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GATGCACACCGCCCGCGTCGCCATCCTGGCCGATAGTCCGCTGCAGCGTCACGTACTGCAGCAGGTGCTGGCCGACAATGGCTATCACGTCGTCCTCAAC AGCGATCCGGAGCGCTTCGACGAAGCGGCCTGGCCCACAGTCGCGACCGACCTGTGGCTGATCGACCTGAGCCAGACCGAGGAATCACCGCTGGTGGACG CGCTGCTGGAGGGGGCCGAGGTGCCCATCCTGTTCGGCGAAGGCCAGGCGCCGGAGCGCTTCACCGATCCTTTCACCCAGTGGGAGAAGCGCCTGATCGG CAAGCTCAAGCGGCTGATCGGCGATCCGGTGGCGGCGGTGGGTCCGGCCCTGGAGACCCTGCTGCAGGACCAGCCGCGACCGCCGCGCCTGACCCTGCCG GAACCCCTGGCCAATCTGCCGCTGCCCGCCGGCGATCCGGCTCCCGAGGTCTGGTTGCTGGCGGCCTCCCTGGGCGGTCCGGCGGCGGTGAAGGCCTTTC
|
|
| Amino Acid Sequence |
>chemotaxis protein
MIDRHDYVALEWVKGEIAETLQQARKALEAFVDNPHDRSRLGFCRTYVHQVYGTLQMVEFYGAALLAEEMELLLQALHEERVNSSDEALEVLMQAILQVP PYLDRVLEARRDLPLAILPLLNDLRSARGEKLLSETSLFSPDLSATPLSLSDAELADRAAPDWLPRLRKLRQALQGAQVGLFRDRDVQLHLDYLLRVFER LDQLCAGSPFGALWPVAAGLTELLQAGELDNSSSIRGLLRQLDRELKRLISDGVTTLNQPAPADLLKNLLFYLAKAPVQSPRIAALKAHYRLDEALPDAE LVGFERSRIVGPDREAMRSVVTALCEELVQIKDSLDLFVRSDRQQPASLRGLLAPLKQIADTLAVLGFGQPRKVVLEQHEAVAELAEGVREASDAALMDI AGALLYVEATLAGMVSGNEVGDAEESRLPTTDIDQLHRVVVREARNGLEQSKDAIIEFIASQWNHVHLESVPLLLTQVRGGLAMIPLERAAAQVQAANDY ICQQLLGKQAVPDWQSLDTLADAITSVEYYLERLAEDPSTPHDMILDIADESLIALGYPPRAAGEGEAAAAPLASGEVEPPAQELPEELPSPAEPVAEEA LEPTALPVEEPADADEEFLIEFEPAAAQEPPTSATQADEQDAAAVSDEAPQAEAEPEGAEPEELLAGIELDSLPPPTPDAEAIAEVLATPVNPINPPAAQ VPQALLPPAADAEPVEEELREVFIEEAGEVQAELERWLPTWQAEPEQRTALSELRRNFHTLKGSGRMVQALVIGELAWALENLFNRRLDHSVAHSAAVQT VVEQTCALLPELVAEYAEDRQRQRDDVDWLAHAAHALARNEALPERAPAGSAAPSAAAALPVAELVESAIPAPAAAEADTQLLDIFRTEAQAHLETVRRF LESADAGSAQPVSDNLLRALHTLKGSAHMAGSSPMAELASALERLAKEYKLAHVAFAEPECGLLAQGAELLEQRLAELDEGSLATPLAGAAEVIARCEGL LEELNPQLPIPAAPLPEQRDVLRLTDFLMPAMDLLLEADERLHAWRTDGDLAACPDLLAERLNTFADGAARVGLADVEQLAEALQVVYAAAASGSLPADA AFFREAEEAQEALISMLNQLAGGMRATPSEERIQGLRGLLAGILAGLPMADTSLLAEPEPEELFDPATATPVAPELALDVELPAEAEAEAEAEAEAEAEA EAEPDLKLPEEPQEPQEPQEPQEPQPLVADSEPVAVEPEAAEPVDPEMQLIFLEEAQDLLDSADRALKRWLVEPQQRFHLGTLQRDLHTLKGGAHLAGVA PVAHLATELDAIYEGLLDGRLAGGAELAQPLRDAHGCLAAQLEELAAGEPVSEHADQVERLQRIRSGHLDDLPALDDSGSAPGEPALGESLADHPADAES ALLEPVPMAAAPAAEGPDAELLAIYIEESRDLLDSMATSLRAWEAEPHNSLELESLLRDLHTLKGGARLAEVDAIGDLAHALEAFYEGLARGRIKPGADL GDLLQRCHDRLHEQLEALARGETPVPAADLIAALRDYRGEPLATGVTAAAVVAAPVFDADTDAEILEIFIEEAQDLLVSMDEALADWSAAPDVAVDELLR CLHTLKGGARLAGLHGLGEQAHELEQQLAELRSLAVGLSEGDRERVRALATQGVDGLQLAVAQLSLPAAAQANAAAEPVETPEAEPDVVREAEQPPVADV AEEEAPADPDVEPAVEGLPVALPEQDSAAAPVMVAVETPAAPVAPLPFVQRLQQVRQQAAQRRSSQELVRVPAALLEQLVNLAGETSIFRGRVEQQVSDI GTTLGEMEATIERVRDQLRRLDTETQAQIISRHHEDVDRAGYEDFDPLELDRYSQLQQLSRALFESASDLLDLKNTLGQRNRDAETLLLQQARVNTELQE SLMQTRMVPFERMVPRLHRVVRQVSAELDKPIELRVGNAEGELDRTVLERIIPPLEHMLRNAIDHGVEDAAGRQRAGKPAEGVISLDLRREGGDIILTLA DDGRGIDLAAVRRKAIERGLMAEDAQLADEELLQFILESGFSTAPTVTQISGRGVGMDVVHQEVKQLGGNMDIHSVAGEGTRFTIRLPFTVSVNRALMVH AGDDLYAVPLNTIEGIVRVTAADLERYYRPGAGTFEYGGQHYDLRYLGHLLGNGQQPKLSGQSLPLPVVLVRAAEYAVAVQVDAVAGSREIVVKSLGPQF AGVPGLSGATLLGDGRVVVILDLLAMIRSQRASGEELARLAQGPATVAEVTRPALVMVVDDSVTVRKVTSRLLERHGMEVFTAKDGVDAIAQLQERQPDI LLLDIEMPRMDGFEVATLVRHDARLKDLPIVMITSRTGEKHRERALSLGVNEYLGKPYQESELLAHIHRLVREHD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|