Pseudomonas sp. MOIL14HWK12:I1, PSEK12I1_RS0112210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I1 PseK12I1DRAFT_scaffold_0.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCTTCCAGATCGGCTTCATGATCTTCATTCCCTTCCTGGTCATCGACCTGGTGATCGCCAGCGTGCTGATGGCCATGGGCATGATGATGCTGTCGCCG ATGATCATCTCCCTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTGGATGGCTGGGCGCTGATCATGGGTACCCTGGCCAGCAGCTTCGGCACCGTCTAGC GGTGCCCCCTTTGCGTGGAGAAGCGAAATGACCCCTGAAGTCGCCGTCGATCTGTTCCGCCAGGGTCTCTGGCTTACCGCGCTGCTGGTGGCGGTGCTGG TGGTGCCGAGTCTGATCGTCGGTCTGATCGTGGCGGTCTTCCAGGCGGCGACCCAGATCAACGAACAGACCCTGAGCTTTCTGCCGCGGCTGATCGTCAC CCTGTTGACGCTGATCGTGCTGGGGCCCTGGATGGTCCGGCAACTGATGGAATTCATCCAGACCTCGGTCGCCAACATCCCGCGGCTGATCGGCTAGCCC
|
|
| DNA Sequence for Gene |
>PSEK12I1_RS0112210
ATGCTCGCCCTCAGCGACGCCCAGATCGGCGGCTGGGTCGGCAGCTTCCTGTTTCCGCTGTTTCGCATCGCCGCGCTGCTGATGACCATGCCGATCATCG GCACCACCCTGGTCCCGGTGCGGGTGCGGATGTATCTGGCCCTGGCCCTGAGCCTGGTGCTGGTGCCGACCCTGCCGCCGATGCCACAGGTGGATGCCAT CAGTCCCCAGGCGCTGCCGCTGATCGTCGAACAGATCCTCATCGGCGCGGTGATGGGGTTCAGCCTGCAGCTGTTCTTCCATGTCTTCGTGGTGGCGGGG CAGATCATCTCGACCCAGGCGGGTCTGAGCTTCGCGTCCATGATCGACCCGGTCAACGGCGCCTCGGCCCCGGTCATGGGCCAGTTCTTCACCATGCTGG TGACGCTGCTGTTCCTGGCCATGAACGGCCATCTGGTGGTGTTCGAGATCCTCGCCGAAAGCTTCGTTACCCTGCCGGTGGGCGATACCCTGAGCGTCGA GCACTTCTGGCAGGTCGCCGGGCGGCTGGGCTGGGTCATGGGCGCCGGCATCCTGCTGGTGCTGCCGGCCATCACCGCGCTGCTGGTGGTCAACATCGCC TTTGGCATCATGACCCGCGCCGCGCCGCAGCTGAACATCTTTTCCGTCGGCATGCCGCTGATCGTGGTGCTGGGCATGGTCATCGTCTGGCTCGGCACCG CCGACATCCTCTCCCACTATGAAAGTCTCGCCAGCGAGGCGCTGCAATGGCTGCGCGAACTCGCCCGAGCCCGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAGATATGCCGCATGGCTGAATCCGATGGCGAAGACCGTACAGAAGACCCCACAGAGAAACGCAAGCGTGACTCCCGGGAGGAGGGGCAGCTCCCGCGAT CACGCGAACTCGGCACGGTGGCGGTCATGCTCTCGGGGGTCGGCGGCCTGCTGATGTACGGCGCCTTCCTGGGCGGCAAGCTGCTGGAGGTGATGCGCAG CAACTTCTCCCTGCGGCGCGAAGAGGTCATGGACGAACGCTTCATGGGCACCTTCCTGCTGGCCTCGGGCAAGGCGGCGATGATCGGGATGCTGCCGATG ATCGCCTTGGTGGTGATCGCCGCCATCGTTGGCCACATCGCCCTGGGTGGCTTCCTCTTTTCCGGCAAGATGCTGGCGCCCAAGCCGAGCCGGATGAATC CCATGTCCGGCATCGCCCGGATGTTTTCCAAGAATTCCCTGGTGGAGTTGCTCAAGGCCCTGGGCAAGTTCTTCATCATCCTCGGCGTATCGGTGCTGGT
|
|
| Amino Acid Sequence |
>flagellar biosynthesis protein FliR
MLALSDAQIGGWVGSFLFPLFRIAALLMTMPIIGTTLVPVRVRMYLALALSLVLVPTLPPMPQVDAISPQALPLIVEQILIGAVMGFSLQLFFHVFVVAG QIISTQAGLSFASMIDPVNGASAPVMGQFFTMLVTLLFLAMNGHLVVFEILAESFVTLPVGDTLSVEHFWQVAGRLGWVMGAGILLVLPAITALLVVNIA FGIMTRAAPQLNIFSVGMPLIVVLGMVIVWLGTADILSHYESLASEALQWLRELARAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|