Pseudomonas sp. MOIL14HWK12:I1, PSEK12I1_RS0101815
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I1 PseK12I1DRAFT_scaffold_1.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGAGTGCTATCCGGTGACCGGCGAGATTACCTATGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTGGATTCGGTCTATGACCTGATCTGGGCCG ACGGCCCCTTCGGCACCGTGACCTACGGCGACGTCTTCCACCAGAACGAGGTGGAGCAGAGCACCTACAACTTCGAGCACGCCAATGTGCCCAAGCTGTT CGAACTGTTCGACTTCTACGAGTCCGAGGCCAATCGCCTGATCGCCCTGGACCTGCCGCTGCCCACCTACGAGATGGTGCTCAAGGCCTCCCACACCTTC AACCTGCTGGACGCCCGCCGGGCCATCTCGGTGACCGAGCGCCAGCGCTACATCCTGCGCGTGCGCACCCTGGCGCGCAGCGTCGCCCAGGGCTACTTCA AGGCCCGGGCCCGGCTGGGCTTCCCGCTGGCCAGCCCCGCGCTGCGTGACGAGGTCCTGGGTCGTGACGATGTCCAGGCGCTGCTCAAGGAGGGCGAATG
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| DNA Sequence for Gene |
>PSEK12I1_RS0101815
ATGAGCACCACTCTGGATTTCCTGGTCGAACTGGGTACCGAAGAACTGCCACCCAAGGCGCTCAAGACCCTTGGCGACAGCTTTCTCGCCGGCATCGAGA AGGGCCTCAAGCAGGCCGGTCTCGGCTATGCCGGCGCCCGCGCCTATGCCGCGCCGCGCCGTCTGGCGGTGCTGGTCGAAGCCCTGCAGACCCAGCAGCC CGAGCGTAGCGTCAACCTGGACGGCCCGCCGCTCCAGGCCGCCTTTGGCGCCGATGGCCAGCCGACCCAGGCGGCCCTGGGCTTCGCCCGCAAGTGTGGC GTCGACATCAGCGCCATCGACCGCAGCGGTCCCAAGCTGAGATTCTCCCAGAGCATTCCCGGTCAACCGGCGGCCAGCCTGCTGCCCGGCATCGTCGAAG CCTCCCTGGCCGAGCTGCCGATTCCCAAGCGCATGCGCTGGGCCGCCCGCCGCGAGGAATTCGTGCGTCCGACCCAGTGGCTGGTGATGCTGCTGGGTGA CGAGGTCATCGACTGCGAGATCCTGACCCGCCGGGCCGGCCGTGAGTCCCGTGGCCATCGCTTCCACCATCCCGACGCCGTGCGCATCAGCGCGCCGGCC CACTATGCAGCCGACCTGCGCGCCGCCCATGTGCTGGCCGACTTCGCCGAGCGCCGCCAGCTGATCGAATCCCGCGTGGCCGAACTGGCCGCGGCGGAGC AGGGCAGTGCCGTGGTGCCGCCCGCGCTGCTGGACGAGGTGACCGCCCTGGTGGAATGGCCGGTGCCGCTGGTCTGCGCCTTCGAGGAACGCTTCCTCGA GGTGCCCCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCTTGCTGGACGCCCAGGGCAAGCTCCTGCCGCGCTTCATCACCGTG GCCAATCTGGAGAGCAAGGATCCGGCGCAGATCGTCAGCGGCAACGAGAAGGTGGTCCGCCCCCGTCTCACCGATGCCGAATTCTTCTTCAAGCAGGACC AGAAGCAGCCGCTGGAAAGCTTCAACGAGCGCCTCAAGAACGTGGTCTTCCAGGCCCAGCTCGGCACCGTCTACGACAAGGCCCAGCGCGTCGCCGCCCT GGCCGCCTTTATCGCCGAACGCATCGGCGGTGATGCCGAGCGCGCCCACCGCGCCGGTGTGCTCGCCAAGTGCGACCTGGCCACCGAGATGGTCGGCGAA TTCCCCGAGATGCAGGGCATCGCCGGCTACTACTACGCCAAAAAGGGCGGCGAAGCCGACGACGTGGCCCTGGCGCTCAACGAGCAGTACATGCCGCGCG GCGCCGGCGCCGAATTGCCGCAGACCCTGACCGGGGCCGCCGTGGCCCTGGCCGACAAGCTCGACACCTTGGTCGGCATCTTCGGCATCGGCATGCTGCC CACCGGCAGCAAGGACCCCTTCGCCCTGCGCCGTCAGGCCCTGGGGGTGCTACGCATCCTCATCGAGAAGGGCCTGGAGCTGGATCTGCCAGCCGCCGTC GCCTTCGCCATCGCCGGTTACGGCGAGCGGGTCAAGGCCGCGGGGCTGCAGGAGCAGGTGCTGGACTTCGTCTTCGACCGGCTGCGTGCCCGCTACGAGG ACGAAGGCGTCGACACCGCCGCCTACCTGGCCGTGCGGGCCCTGCGCCCGGCTTCGGCGCTGGACTTCGATCAGCGCGTCCAGGCCGTGCAGGCCTTCCG CCGCCTGCCCGAGGCCGAAGCCCTGGCCGCCGCCAACAAGCGCGTCTCCAACCTGCTGGGCAAGTTCGAGGGCACGGTCGCCACCCAGGCCGATGCCGCC CTGTTCGAGACCGACGCCGAGCGCACCCTGGCCGCGGCCATCGCCGATGCCGAGCGGGAAGCCGCGCCCCTGGCCGAAGCTCGCCGTTATCGCGAAGCCC TGGAGCGCCTGGCCAGCCTGCGCGCCCCGGTGGATGCCTTCTTCGACGAGGTATTGGTCAACGCCGAGGACGAGCGCGTCCGCGCCAATCGCTATGCGCT GCTCGCCCACCTGCGTGGCCTGTTCCTGGGCATCGCCGACATCTCGGTGCTGGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCATGAAGCTGATCGTGCTGGACCGCGATGGCGTCATCAATGTCGATTCCGATGACTACGTGCGCAGCGCCGAGCAGTGGCAACCGCTGCCCGGCAGCC TCGCCGCCATCGCTCGCCTGAACCGGGCCGGTTGGCAGGTGGCCGTGGCCACCAACCAGTCCGGCCTGGCCCGCGGCTACTTCACGGAAGACGACCTGAC GGCCATGCACGAGAAACTGCAGCGGCTGCTGGCGGAGGAGGGCGGTCGGGTCGACCTGATCCTGCACTGCCCCCATGGCCCGGAAGCGGGCTGCGACTGC CGCAAGCCGCTGCCCGGCCTGTTTCGCGCCATCGCCCACCACTATGGCCGTGCCGACCTGAGCGGCGTGCCGGTGGTGGGCGACAGCCTGCGCGATCTGG AAGCCGGCGTGGCCCTTGGCTGCACACCCTGTCTGGTGCGGACCGGCAAGGGTGAACGCACCCTGGCCAAGCCTTTGCCAGCCGGCACCCGGGTCTTCGC
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| Amino Acid Sequence |
>glycine-tRNA synthetase subunit beta
MSTTLDFLVELGTEELPPKALKTLGDSFLAGIEKGLKQAGLGYAGARAYAAPRRLAVLVEALQTQQPERSVNLDGPPLQAAFGADGQPTQAALGFARKCG VDISAIDRSGPKLRFSQSIPGQPAASLLPGIVEASLAELPIPKRMRWAARREEFVRPTQWLVMLLGDEVIDCEILTRRAGRESRGHRFHHPDAVRISAPA HYAADLRAAHVLADFAERRQLIESRVAELAAAEQGSAVVPPALLDEVTALVEWPVPLVCAFEERFLEVPQEALITTMQDNQKYFCLLDAQGKLLPRFITV ANLESKDPAQIVSGNEKVVRPRLTDAEFFFKQDQKQPLESFNERLKNVVFQAQLGTVYDKAQRVAALAAFIAERIGGDAERAHRAGVLAKCDLATEMVGE FPEMQGIAGYYYAKKGGEADDVALALNEQYMPRGAGAELPQTLTGAAVALADKLDTLVGIFGIGMLPTGSKDPFALRRQALGVLRILIEKGLELDLPAAV AFAIAGYGERVKAAGLQEQVLDFVFDRLRARYEDEGVDTAAYLAVRALRPASALDFDQRVQAVQAFRRLPEAEALAAANKRVSNLLGKFEGTVATQADAA LFETDAERTLAAAIADAEREAAPLAEARRYREALERLASLRAPVDAFFDEVLVNAEDERVRANRYALLAHLRGLFLGIADISVLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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