Pseudomonas sp. MOIL14HWK12:I1, PSEK12I1_RS0100800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015969 | guanosine tetraphosphate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00691
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:3.30.460.10:FF:000001 | GTP pyrophosphokinase RelA | - | - | 189 | 322 | 2.5E-53 |
| Pfam | PF19296 | RelA/SpoT, AH and RIS domains | IPR045600 | RelA/SpoT, AH and RIS domains | 456 | 560 | 1.1E-9 |
| FunFam | G3DSA:1.10.3210.10:FF:000001 | GTP pyrophosphokinase RelA | - | - | 1 | 188 | 8.9E-86 |
| SMART | SM00954 | RelA_SpoT_2 | IPR007685 | RelA/SpoT | 232 | 342 | 5.1E-62 |
| NCBIfam | TIGR00691 | JCVI: RelA/SpoT family protein | IPR004811 | RelA/SpoT family | 23 | 700 | 0.0 |
| SUPERFAMILY | SSF109604 | HD-domain/PDEase-like | - | - | 3 | 188 | 3.14E-72 |
| Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | - | - | 1 | 187 | 1.3E-74 |
| Pfam | PF13291 | ACT domain | IPR002912 | ACT domain | 626 | 702 | 4.8E-13 |
| CDD | cd00077 | HDc | IPR003607 | HD/PDEase domain | 40 | 163 | 6.31906E-6 |
| PANTHER | PTHR21262 | GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE | - | - | 6 | 701 | 0.0 |
| Pfam | PF04607 | Region found in RelA / SpoT proteins | IPR007685 | RelA/SpoT | 232 | 341 | 3.5E-35 |
| FunFam | G3DSA:3.10.20.30:FF:000002 | GTP pyrophosphokinase (RelA/SpoT) | - | - | 377 | 451 | 1.5E-34 |
| Pfam | PF13328 | HD domain | - | - | 23 | 172 | 3.5E-52 |
| SUPERFAMILY | SSF81271 | TGS-like | IPR012676 | TGS-like | 372 | 444 | 4.58E-22 |
| Gene3D | G3DSA:3.30.70.260 | - | - | - | 626 | 705 | 9.2E-12 |
| Gene3D | G3DSA:3.10.20.30 | - | IPR012675 | Beta-grasp domain superfamily | 378 | 451 | 1.2E-29 |
| SUPERFAMILY | SSF55021 | ACT-like | IPR045865 | ACT-like domain | 628 | 703 | 1.95E-6 |
| CDD | cd01668 | TGS_RSH | IPR033655 | RelA/SpoT, TGS domain | 386 | 444 | 8.23657E-31 |
| SMART | SM00471 | hd_13 | IPR003607 | HD/PDEase domain | 38 | 150 | 1.8E-8 |
| CDD | cd05399 | NT_Rel-Spo_like | IPR007685 | RelA/SpoT | 207 | 328 | 1.62121E-38 |
| Pfam | PF02824 | TGS domain | IPR004095 | TGS | 385 | 444 | 3.7E-18 |
| Gene3D | G3DSA:3.30.460.10 | Beta Polymerase, domain 2 | IPR043519 | Nucleotidyltransferase superfamily | 189 | 322 | 2.3E-44 |
| SUPERFAMILY | SSF81301 | Nucleotidyltransferase | IPR043519 | Nucleotidyltransferase superfamily | 178 | 389 | 1.41E-60 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.