Pseudomonas sp. MOIL14HWK12:I2, PSK12I2_RS0117085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_0.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCATTGGCGTGGATTACCGTGAAGGCCGGCGATTCGACTGGGCGCGGCTGTGCGGGCACCTGCGCGCCCGCTTGGCCGAACAGGCGCAGCCGCCGCTGA TCCGCTTCGAACCGGGACGTTTCCTCGCGGCCTTCTGCGGCTACTACGCCATGGAGGTGCTGGATACCAAGACCAGCCACGGCCAGCACTTCCTGGTCTG TCGCGGCGGGACCCATCAGTTCCGCCTGCCGGTGGCCCAGGGGCACGATCATCCGGTGCTGCACCTGCCCCGCGAGGGGCGGGCGACCGCGACTGGAGGC AAGGCCTGGACAGTGGTGGGTCAGCTCTGTACCCCCAAGGACATCCTCAGCCGCGGCCAGCCGCTGGGTGAGGTCCGGGTCGGCGACCTGCTGGTGCTGC CCCTGGCCGGCGCCTATGGCTACAACATCTCCCACGCGGATTTCCTCTGCCATCCGCGCCCGCGGCAGCTGTTCCTCGCCGGCAACGGGAGTGTCCCGGC
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| DNA Sequence for Gene |
>PSK12I2_RS0117085
GTGAGCGTTGCGATCCCGCGGGTCTGGGTGGCGGTGAACGTGCTGCTGGGCACGGTCACCGTCAGCCTGGCCAATACCGCGCTCAATCCGGCGCTGCCGG CCTTCATCGCCGCCTTCGACCTGGGGCCGCTGCTGGCCAGCTGGATCGTCGCCGGCTTCATGGTGGCCATGGGCATCACCATGCCGCTGACCGGCTTTCT CGCCGGGCGCATCGGGCGGCGGCGACTCTATCGCCTCGGGCTGCTGGCCTTCATCGCCGGCTCGGCGCTGGGCGCCCTGGCCGATTCCATCGCCGGCGTG CTGCTGGCGCGCATGGTCCAGGGGGTGGCCAGCGGCCTGATGATTCCCCTGGCACTGGGCATCATCTTTTCCGTCTATCCCAAGGAGGAGCGTGGCCGGG TGACCGGCTGGTGGGGTGGGGCGGTGATGCTGGCGCCGGCGGTGGGGCCGCTGTGCGGCAGTCTGCTGCTGGAGGTGTTCGACTGGCGCGCCCTGTTCCT GCTCAACGTCCCGGTGGGCCTGCTGGCCCTGGCCATGGGGCAGGTGGTGCTGCCCGCGGATGGCCCCCGCGAACGCAAGCCCTTCGACCTGGCCGGCTAC CTACTGATCGCCAGTGGCCTGGGGCTGCTGCTGGTAACCCTCGGCCGGCTGCGCGAGCTGGCGGCGCTGGCCGACCCCCTCAATCTGCTCGCCCTGGGCG CCGGACTCCTCTGCCTGCTGGCCTTCGTCCGGCTGCAGCTGCAGCGCAGCCATCCGCTGCTGCCGCTGCGCCTGTTCGCCCTGCGCGGCTATCGGGCCAG CGTCATCATCGCCGTGGTCCAGGCGGTGGGCATGTTCGAATGCCTGGTGCTGCTGCCGCTGCTGGTCCAGCTGGTGCTGGGCCACAGCGCCCTCTGGACC GGCCTGGCGCTGCTCTGCACGGCCCTGGCGGCGGCGCTGTTCGGCCAGGTCGGCGGTCGCCTGCTCGACCGCCGCGGACCCCGCGGGGTGATCGCCACCG GGCTGGCGCTCAGCGGTCTCGCCACCCTGGCCCTCGGTGTGGTCGGCAGCCATGCCGGGCTGGCCTGGATCTGCGCGCTCATGGTGCTCCGCGGCGTCGG CCTGGGGCTGTCCTACATGCCGGCCACCACCGCCGGGCTCAACACCTTGCCGGATGCCCAGGTCACCCAGGGCGCGGCCATGAACAACATCGCCCGGCGC CTGGTGTCCTCGGTGGCCGTGGTGGCCGCCTCCCTCTGGCTGGAACTGCGCCTGGGCGGAGCGGCCGGCTGGGGCCCGCGCCAGGCCGCCACCGGCGTCG CCATCCAGGACGCCTTCATCGCCACCGGCCTGTTCATCCTGCTGGCCCTGCCCTGGGCCTGGCGCTTTCCCGCTGCTCAACCCCTTTCCGTTCGGAGGTA CTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCTCAGCTTTCACTTGCCGCGCAGCCCTGGCCGTCGCCCGCCGATGCCGCCCTCTATCGCCAGGTCGAGCAGCGCGTGGTGGCGCAGCTGCTGCAGAC GCTGATCTACGAAGAGGTGCTCAAGGCCGAGGTCCAGCCGGTGGCGGAGGGGCTGGCAGCGTATCGCCTGGCCGGTACCGCCGCCGATGGCACACCGGTG CAGTACCTGGGCTATGCGCCCGCAGATGCCAGCTTCGGCCTGATCCGCCTGGATCCGCAGCGCCTGGTGCGCCAGGACGATAAGGGGAGCCGCGCGCCGA CGCTGCACGAGACCCTGGCCGAATTGCTCGGCGAGCAGAGCGACTCGCCGCTGTGGCCGCGCTTCGTCCAGGAGCTGGAGCAGACGCTGCTCAAGGATCT GCAGTCCCGCCGCCAGGACTACCGTCCCGCCCGCCCGGCCCACGAGCTGGACGTGGACGAGCTGGAGCGGCACTTCATGGACGCCCATGGCTACCACCCC
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| Amino Acid Sequence |
>MFS transporter
MSVAIPRVWVAVNVLLGTVTVSLANTALNPALPAFIAAFDLGPLLASWIVAGFMVAMGITMPLTGFLAGRIGRRRLYRLGLLAFIAGSALGALADSIAGV LLARMVQGVASGLMIPLALGIIFSVYPKEERGRVTGWWGGAVMLAPAVGPLCGSLLLEVFDWRALFLLNVPVGLLALAMGQVVLPADGPRERKPFDLAGY LLIASGLGLLLVTLGRLRELAALADPLNLLALGAGLLCLLAFVRLQLQRSHPLLPLRLFALRGYRASVIIAVVQAVGMFECLVLLPLLVQLVLGHSALWT GLALLCTALAAALFGQVGGRLLDRRGPRGVIATGLALSGLATLALGVVGSHAGLAWICALMVLRGVGLGLSYMPATTAGLNTLPDAQVTQGAAMNNIARR LVSSVAVVAASLWLELRLGGAAGWGPRQAATGVAIQDAFIATGLFILLALPWAWRFPAAQPLSVRRYS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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