Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_9.10_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAATCCCACCCGCTGCAGGCGCTGGTGTCCGAGCCGATCAAGCCCATCATCGACAGCGTCATCATGTCCAACGCGGTACACGGCTACATCAGCCAGTCCG ACAAGGGCGACCTGGTGATCGGCGCCGGTATCGACAGCTGGGTCGGCTACGGCCAGCGCGGCTCCTACCCGGTGATCGAGCACACCCTGCAGGCCATCGT CGAGATGTTCCCGATCCTCTCGCGGGTGCGCATGAACCGCCAGTGGGGCGGCATCGTCGACACCTCGCCCGACGCCTGCCCGATCATTTCCAAGACCCCG GTGGAAAATCTGTTCTTCAACTGCGGCTGGGGTACCGGCGGCTTCAAGGCCACCCCCGGCTCGGGCAACGTCTTCGCGGCGTCGCTCGCCTCCGGCGAGA TGCATCCGCTGGCCAAGCCCTTCTCCATCGACCGTTTCCACACCGGCGCGCTGATCGACGAACACGGCGCAGCGGCCGTCGCGCACTAAGGAGCCCGAGC
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DNA Sequence for Gene |
>PSK12I2_RS0112250
ATGTTGTACATCCATTGTCCCCACTGTGGGGAACTGCGCTCCGAAGAAGAATTCCACGCCGCCGGCGAGGCGCACATCCCGCGTCCGCTGGATCCCGAGG CCTGCAGCGACGCGGAGTGGGGCGATTACATGTTCTTCCGCGACAACCCGCGCGGCCTGCGTCACGAGCTGTGGGTCCACGCTTCGGGCTGCCGCCAGTA CTTCAACGCGACCCGTAACACCGAGACCTACGAAATTCTCGAAACCTATCCGATCGGCGAGCAACCCCGCTTCACCGCCGAGCGAGGAGAGCGCACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCAGGTCCATCGACTCACCCAGGGCGGTCGCCTGGACCGCAGCCAGGCCATCACCTTCACCTTCAACGGTCAGACCTACCAGGGCTTCAAGGGTGACAC CCTGGCCTCGGCCCTGCTGGCCAACGGCGTGGACGTGATCGGCCGCAGCTTCAAGTACTCCCGGCCGCGCGGCATCGTCGCCGCCGGTGCCGAAGAACCC AACGCCATCATGCAGATCGGCGCCACCGAGGCCACCCAGGTGCCCAACGTGCGGGCCACCCAGCAGGCGCTGTACCAGGGCCTGGTCTCCGCCAGCACCA ACGGCTGGCCGAGCGTCAACAACGACCTCATGGGCATCCTCGGCAAGGTCGGCGGCAAGATGATGCCGCCCGGGTTCTACTACAAGACCTTCATGTATCC GCAGAACCTGTGGATGACTTACGAGAAGTACATCCGCAAGGCCGCCGGCCTCGGCCGGGCGCCGACCCAGGTCGATCCGGATACCTACGACAACTTCAAC
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Amino Acid Sequence |
>sarcosine oxidase subunit delta
MLYIHCPHCGELRSEEEFHAAGEAHIPRPLDPEACSDAEWGDYMFFRDNPRGLRHELWVHASGCRQYFNATRNTETYEILETYPIGEQPRFTAERGERT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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