Pseudomonas sp. MOIL14HWK12:I2, PSK12I2_RS0107930 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_5.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGATCCTCCAGCAACTGCTGCAGGAGCAGGTCCCGGTCCGCGACATCCGTACCATCGCCGAAGCCATCGCCAACGTCGGTCCGCGGAGTCAAGATCCC GCCGCCATCGCCGGTGCCGTACGGGTCGCCTTGTCCCGCGCAATCGTCCAGAACATCGTTGGAATGGAGCCTGAGCTGCCTGTTATCACCCTTGAGCCAA GGTTGGAACAGATGTTGCTAAGTAGTATGCAGAAGGCCGGTCAAGGCGCCGAGGACGGCATGTTCCTCGAGCCTGGCATGGCTGAAAAACTGCAGCGTTC CCTCATCGAGGCAGCGCAGCGTCAGGAAATGATGGGTAAGCCAGTGGTGCTGCTGGTAGCCGGTGCGATCCGCGGGATGATGTCCCGCTTCGCGCGGATG GCGGCGCCGAACATGAGTGTACTGGCCTACCAGGAAATTCCGGACAACAAGCAGGTCACCATCGTCGCTACCGTTGGCCAGAATGGCTGAGGTCTAGATC
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| DNA Sequence for Gene |
>PSK12I2_RS0107930
|flhF
ATGCAAGTCAAACGTTTCTTCGCCGCCGATATGCGTCAAGCCATGAAGCTGGTACGCGACGAGCTGGGCCCGGATGCCGCCATCCTCAGCAACCGCCGGG TCGCCGGTGGTGTCGAGCTGACCGCGGCGCTGGACTACCAGGCTCCGGCACCGGCCGCGCCCAACGCGGAGCTGCAGGCGGAGTTGCGCAAGACCCATGC GAAGATCGCCCAGGCCCATGCCGACCTCAGCATCCGCGCGCCGGGCGTGCCCTCGGCCGCACCCAAGGACAAGCAGCTGCTCGGCGCCATCAGCGCCGCC GACAGCCGCCGCGAGCCGGTGATCGCCCCGCCGCGTGCGCCCCAGCCGGCCGCTGCCGCCCCTGCCGCCAGCGCCGCGCCGGAAGACCGTCGCGCCCTGG AAGCCATGCGCAGCGAACTCAGCGGTCTGCGTGAACTGCTGGAAGTCCAGCTCGGCTCCATGGCCTGGACCCAGGTGCAGTCCACCCGTCCGCAGCAGGC CGGCCTCTGGCGTCGTCTGCAGCGCATGGGTCTGCCGGCCGATCTGGCCCGCCACCTGCTCGACAGCGTCGCCAAGATCCAGGACCCGCGCCATGCCTGG CGCATGCTGCTGGCCAACTTCGCCCAGCTGGCCAAGACCACCGATGCCAAGATTCTGGAGGAGGGTGGTGTCGTCGCCTTCGTCGGTCCGGCCGGCATGG GCAAGACCACCACCCTGGCCAAGCTCGCCGCCAGCTACGTGCTCAAGTACGGTCCCCAGAGTCTGGCGCTGGTCAGCATGGACAGCTTCCGCATCGGTGC CCAGGAGCAGATCAAGACCCTTGGCCGCATCCTCGACGTGCCGGTGACCCTGGTCGACCCGGGCCAGTCCCTGGCCCAGGCGCTGGCACCCCTGGCACGC AAGCGCCTGGTGCTGATCGACACCGCGGGCATGCCCGCCAATGATCCGGCGCTCAAGGTGCAGCTCGAAGCCCTGGCCAACCGCCAGCTGAAAATTCGCA ACTATCTGGTATTGGGTGTCACCAGCCAGAGCCAGGTGCTCAAGGCGGCCTACCACAGCTATCGGCGCTGCGGCCTGAGCGGCTGCGTGCTGACCAAGCT GGACGAAGCCGCCAGTCTCGGCGAGGCCCTGGGTCTGGCCATCAGCCAGCGCCTGCCGGTGGCCTACATTGCCGACGGCCCGCGCATCCCGGACGACCTG CATCCGGCCCGCAGCCACCAGCTGGTGAGCCGCGCGGTGAGCCTGCAGGCCCCCGAGGAACCGAGCGAAGAAACCATGGCGGGCATGCTTGCCGGCCTGT ATCAGAGCAATGCCCGCCGCGCCGGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCAGACGAACGGTAGTGGTGCATCGCATGCCTGGGCACGCCAAATGCACTTGGTCTAAAGTGTGACGGATTTCAATCAAAGGTATCAGGCAATGGGTAG CATGCATCCCGTCCAAGTCATAGCGGTCACGGGCGGTAAAGGCGGTGTCGGCAAGACCAACGTGTCGGTCAACCTGGCCTTGGCCCTGGCCGATATCGGG CGGCGCGTCATGCTGCTCGACGCCGACCTGGGCCTTGCCAACATCGACGTTCTGCTCGGCCTGTCGCCCAAGCGCACCCTGGCCGACGTCATCTCCGGCG AGTGCGAGCTGCGCGACGTGCTGCTGCACGGCCCGGGCGGCATCCGCATCGTCCCGGCGGCCTCGGGCACCCAGGCGATGGTCAATCTGACGCCGGCCCA GCACGCCGGTCTGATCCAGGCCTTCAGCGACATCAGCGAAAACCTCGACGTGCTCATCGTCGATACCGCGGCCGGCATCGGCGACCAGGTGGTCAGCTTC
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGPDAAILSNRRVAGGVELTAALDYQAPAPAAPNAELQAELRKTHAKIAQAHADLSIRAPGVPSAAPKDKQLLGAISAA DSRREPVIAPPRAPQPAAAAPAASAAPEDRRALEAMRSELSGLRELLEVQLGSMAWTQVQSTRPQQAGLWRRLQRMGLPADLARHLLDSVAKIQDPRHAW RMLLANFAQLAKTTDAKILEEGGVVAFVGPAGMGKTTTLAKLAASYVLKYGPQSLALVSMDSFRIGAQEQIKTLGRILDVPVTLVDPGQSLAQALAPLAR KRLVLIDTAGMPANDPALKVQLEALANRQLKIRNYLVLGVTSQSQVLKAAYHSYRRCGLSGCVLTKLDEAASLGEALGLAISQRLPVAYIADGPRIPDDL HPARSHQLVSRAVSLQAPEEPSEETMAGMLAGLYQSNARRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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