Pseudomonas sp. MOIL14HWK12:I2, PSK12I2_RS0105030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_3.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGAGCAGCTGGCTCTGGGGGAATTCGCGCATGCGCAGGGCGTATTCGATCACCGGACCGCTGCCGCCCAGCTCGGGAGCGCTTTCGCTGCCGGTGATGG CCACCACGTCCTGGTAGAGATCGCGGGTCAGGCGCTGGTTGAGGCGCAGCTCCTCGCGGCAGAAGTGGCCACGGGCTTCCAGGTCGGTGAAGTCGAGGAA ACCGAAATTCACCGGCTTCTTGATCTTGTAGGCGACCTCGCCAGTCAGCACGACCCAGGAAATATGGGTTTCGATGACCCGGAACGCCGAGGTGGGATGG GGATAGAGCGCCGGGTTCTGCAGGGCGGAAATCAGGAGCTGGCTCACGGGCGGTCCTTGTAGGGAATGGATGGCGGCATTATCGCTGCCAGGGCGGTCCA CGCAAGCCGCGACACCGGGAAGGGGCGTCCTTGAACCCCAGCTGACGAAGCGCTGGCAGGCCGCTGTCGGCCACCGGGCAAGTGCGTATAATGCGCCGCC
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| DNA Sequence for Gene |
>PSK12I2_RS0105030
ATGAAGCGACCCCGATCCTCTCGTTCCCGCAAGCGCAAGACCTTTGACTGGCGCCGCCTGTCCGGCTGGGCAGTCAAGCTTGGTCTGGTCGCGCTGGTAG CCCTGGCTGGCGTATGCATCTATCTGGATGCCGTGGTCCAGGAAAAATTCTCCGGCAAGCGCTGGACCATTCCGGCCAAGGTCTATGCCCGGCCGCTGGA ATTGTTCAATGGCGTCAAGCTCAGCCGTGACGACTTCCTCACCGAACTCGATGCCCTCGGCTATCGCCGCGAGAAAACCGTGGACGGCCCCGGCAGCGTC TCCGTGGGCGCCTCCACGGTCGAGCTGAACACCCGCGGCTTCCAGTTCTACGAAGGCGTCGAGCCGGCGCGGGCGATCCGTGTGCGCTTCGCCGGCGGCA CCGTCTCCGGCGTCAGCGCTCTGGATGGCAGCAATCTGGCCGTGGCCCGCCTGGAACCGCTGATGATCGGCGGCATCTATCCGGCACATAACGAGGATCG CATCCTCATCAAGCTCGACCAGGCGCCGCCGCACCTGGTCGATGGCCTGGTGGCCGTCGAGGACCGCGAGTTCTGGCATCACCACGGCGTCTCGCCCAAG TCCATCGCCCGGGCGGTCTGGGTCAACGCCACCAGCGGCCAGGTGCGTCAGGGTGGCAGCACCCTGACCCAGCAGCTGGTCAAGAACTTCTACCTCACCA ACGAGCGCAGCATCACCCGCAAGGGCACCGAAGCCCTGATGGCGCTGCTGCTGGAGCTGCACTACAGCAAGCAGGAGATCCTCGAGGCCTACCTCAACGA GGTGTTCCTCGGTCAGGACGGCTCGCGCGCCATCCACGGTTTCGGTCTGGCCGCCCAGTACTTCTTCGGCCAGCCCTTCAGCGAGCTGAAACTGCATCAG GTCGCCCTGCTGGTCGGTCTGGTGAAGGGCCCGTCATACTACAACCCGCGCCGTTATCCCGAGCGCGCCATGACCCGCCGCAACCTGGTGCTCGACCTCA TGGCCGAGCAGGGCGTGGTCAGCGCCACCGAGGCCGAAGCGGCCAAGGCTCGGCCGCTGGGCATCACCAAGGCCGGCAGCCTGACCAACAGTTCCTTCCC GGCCTTCGTCGACTTGGTCAAGCGCCAGCTCAAGCAGGACTACCGCGACGAAGACCTCACCGAAGAAGGGCTGCGCATCTTCACCAGCTTCGACCCCATC CTGCAGACCAAGGCCGAAGCCGCCATGGGCGAGACCATGAAGCGCATCGACGGCCGCAAGGGTGCGGAAAACGTCGAGTCGGCCATGGTGGTGACCAATC CGGAAACCGGTGAGGTCCAGGCGCTGCTGGGTGGCCGCGATCCACGCTTCGCCGGCTACAACCGCGCCCTCGACGCGGTGCGCCAGGTCGGCTCGCTGAT CAAGCCGGCGGTCTATCTCACTGCCCTCGAGCGCCCCAGCAAGTACACCCTGACCACCCTGATCCAGGATGAGCCCTTCTCGGTGAAGGGCGCCGATGGC CAGGTCTGGCGGCCGCAGAACTACGAGCACAAGGCGCACGGCACCATCTTCCTCTATCAGGGGCTGGCGCATTCTTACAACTTGTCCACCGCGCGCCTGG GCCTGGATCTCGGGGTCCCCGAGGTGCTCAAGACCGTCGCGCGCCTGGGCGTGAGTCGCGCCCTGCCGCCCTATCCGGCGACCCTGCTCGGCGCCGGTGC CCTGACGCCCATGGAAGTGGCGACCATGTACCAGACGCTGGCCAACGGTGGCTTCAACACGCCGCTGCGCAGCATCCGCAGCGTGCTCGACGCCAATGGC GAGCCGCTCAAGCGCTATCCCTTCCAGATCGAGCAGCGCTTCGATACCGGCGCCATCTACCTGGTGCAGTACGCCATGCAGCGCGTCATGCGCGAGGGTA CCGGGCGCTCGGTCTACAACCAGATCCCCACCAGCGTGAACCTGGCGGGCAAGACCGGCACCACCAACGATTCCCGCGACAGCTGGTTCTCCGGCTTCAG CCAGGATCTGCTGGCGGTGGTCTGGCTGGGTCGCGACGACAACGGTAAGACACCCCTGACCGGTGCCACCGGCGCCCTGCAGGTCTGGAGCAACTTCATG CGTCGCGCCGATCCGGTCTCCCTGGACATGCCGGTACCGGACAACATCACCCAGGCCTGGGTCGATGCCACCACCGGGCGCGGCACGGATCCCTCGTGTC CCAACGCCGTGCAGATGCCTTATATTCGCGGCAGTGAGCCGCCACCGGGCGCCTCCTGTGGCGCGCCGGCCGCACCCGCCGCCGGCGGCAACGGCAACGG CGGCAATCCGGTCATGGATTGGGTCAAGGGTTGGTTGAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGGTCCCAAGGTGACGAAAGCAGTCTGGCCGGTGATGATCGCCGGTGTTCTCCTCGCCGGTTGCGCCGCGCCGCAGCGTGGCGCCATCCCCGTGGTCGA TTCCGGCGGTCCGGTGTCCAACGGCGAACTCTATCGCCAGGGCAACAACCGGCCCCTGCCGGCGCAACGTCAGGCCCCCGTGGCCGCCGCGCCCAGCGCG CCGGCCGATTCCGGGGTGACCGTCATGGTGCCGGGTGGTAGCTCCGCACCCCTGGAAACCTATGCCGCGCCGGCGGCCTCGGCGCCGCTGATCACCTCGT CCAGCCCCAGCGCACCGCCTGCCCAGGCGCCGGTGCAGCCGAGCTATTCGCAGCCGGTCTATCCGCCTGCCACCCCGGGCGGCTCCGCGGCTGCCAGTAC GGCGCCGACCGGCATTCCCGCCACCAGCAATTCCAGTGGTGGTGGCCTGGCTGCCGACGAACAACTCGACGGTCCGGTGCTGGCCCTGCTGACCACCGCC
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| Amino Acid Sequence |
>penicillin-binding protein
MKRPRSSRSRKRKTFDWRRLSGWAVKLGLVALVALAGVCIYLDAVVQEKFSGKRWTIPAKVYARPLELFNGVKLSRDDFLTELDALGYRREKTVDGPGSV SVGASTVELNTRGFQFYEGVEPARAIRVRFAGGTVSGVSALDGSNLAVARLEPLMIGGIYPAHNEDRILIKLDQAPPHLVDGLVAVEDREFWHHHGVSPK SIARAVWVNATSGQVRQGGSTLTQQLVKNFYLTNERSITRKGTEALMALLLELHYSKQEILEAYLNEVFLGQDGSRAIHGFGLAAQYFFGQPFSELKLHQ VALLVGLVKGPSYYNPRRYPERAMTRRNLVLDLMAEQGVVSATEAEAAKARPLGITKAGSLTNSSFPAFVDLVKRQLKQDYRDEDLTEEGLRIFTSFDPI LQTKAEAAMGETMKRIDGRKGAENVESAMVVTNPETGEVQALLGGRDPRFAGYNRALDAVRQVGSLIKPAVYLTALERPSKYTLTTLIQDEPFSVKGADG QVWRPQNYEHKAHGTIFLYQGLAHSYNLSTARLGLDLGVPEVLKTVARLGVSRALPPYPATLLGAGALTPMEVATMYQTLANGGFNTPLRSIRSVLDANG EPLKRYPFQIEQRFDTGAIYLVQYAMQRVMREGTGRSVYNQIPTSVNLAGKTGTTNDSRDSWFSGFSQDLLAVVWLGRDDNGKTPLTGATGALQVWSNFM RRADPVSLDMPVPDNITQAWVDATTGRGTDPSCPNAVQMPYIRGSEPPPGASCGAPAAPAAGGNGNGGNPVMDWVKGWLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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