Pseudomonas sp. MOIL14HWK12:I2, PSK12I2_RS0104050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_3.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGGCTACGGCTGGTGGGCAGCGGCACCTACGAAGGCACCCTGATCCAGGACGCCGCCGTAGGCACCGACCTGGGCAAGAAATTCGTGCTGGTGGTGGA CGGCCAGAACAAGGCCGCCTATCGCAACGTCGATCTGGGCCCACGCCTGGAAGGTCTGCGCATCGTGCGCAAGGGGTTGGAAGCCGGCGATCGCATCGTG GTCAACGGCCTGCAGCGAGTGCGTCCGGGCATGACCGTCGACGCCCAGTCGGTGCCCATGGCCGATGCCACCACCCTGGCCGCCCTCAAGCGCCAGCGCG ACGCGGTCCTCGCCAGCCTGCCGGCGCCCACCCAGCCGCTCAAGGTGGGTAGTCGCTAGACCCCAGGCTCAACCTTCTTCCCATTTCAGACTTTCACCGT CCAGGCATCGCGTCTATCGCGGTCATGGACCGCTCCTACCGTAGGAGCGGCCCATGGCCGCGATGGACGCGACGGCCGCCTGTTGCCCAAGGAAAGCCCG
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| DNA Sequence for Gene |
>PSK12I2_RS0104050
ATGAACTTCTCCCAGTTCTTCATCCGCCGGCCGATCTTCGCCGCCGTGCTCTCGCTGATCATCCTGATCGGCGGGGCCATCTCGCTGTTCCAGCTGCCGA TCAGCGAATACCCCGAGGTCGTCCCGCCCACCGTGGTGGTGCGCGCCACCTTCCCCGGCGCCAACCCCAAGGTGATCGGCGAGACCGTCGCCGCGCCCCT GGAGCAGGCCATGAACGGCGTGGAGCACATGCTCTACCTGTCGTCCCAGTCCACCGCCGACGGCAAGCTGACCCTGACCATCACCTTCGCCCTGGGGACC AATCTGGATACCGCCCAGGTGCAGGTGCAGAATCGCGTCACCCGCACCCTGCCCAAGCTGCCGGAAGAGGTGCAGCGCCTCGGCGTGACCGCCGACAAGG CTTCGCCGGACCTGGCGATGGTGGTGCACCTGACCTCGCCGGATCAGCGCTACGACATGCTCTATCTGTCCAACTACGCCCTGATCAACGTCAAGGACGA GCTGGCGCGACTGGACGGCGTGGGCGACGTCCAGCTGTTCGGCATGGGCGACTATTCCCTGCGCGTCTGGCTCGATCCGGACAAGGTGGCCTCGCGCGGC CTGACTGCCAGCGACGTGGTCACCGCCATCCGCGAGCAGAATCGCCAGGTCGCCGCCGGTGCCCTCGGCGCGCCGCCGGCCCCGGGCAGCACCAGCTTCC AGCTGGCCATCAACACCCAGGGCCGCCTGGTGGACGAGGAAGAATTCGCCAACATCATCGTGCGCGCCGGCAGCGACGGCCAGATCACCCGGCTGCGCGA CATCGCCCGCATCGAACTGGGCTCCAACCAGTACGCCCTGAGGTCCCTGCTGAACAACCAGCCGGCGGTGGCCATCCCGATCTTCCAGCGCCCCGGCAGC AACGCCATCGACCTGTCCAACCAGGTACGCGCCAAGATGGCCGAGCTCAAGCAGAGCTTTCCCCAGGGCATGGACTACGAGATCGTCTACGACCCGACCA TCTTCGTGCGCGGCTCCATCGAAGCCGTGGTGCACACCCTGTTCGAAGCCATCATCCTGGTGGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCCATCATTCCCTTGGCGGCGGTGCCGGTGTCGCTGATCGGCACCTTCGCGGTGATGCACGCCTTCGGCTTCTCGCTCAATGCGCTGTCCTTGTTCGGC CTGGTGCTGGCCATCGGCATCGTGGTGGACGACGCCATCGTGGTGGTGGAAAACGTCGAGCGCAACATCGGCCTCGGCCTCGATCCGGTGGCCGCCACCC GCCGTGCCATGGGCGAGGTGACCGGGCCCATCATCGCCACCGCCCTGGTGCTCTGCGCGGTGTTCGTGCCGACCGCCTTCATCTCCGGTCTCACCGGGCA GTTCTATCGCCAGTTCGCCCTGACCATCGCCATCTCCACGGTGATCTCGGCCTTCAACTCCCTGACCCTGTCGCCGGCCCTGGCCGCGGTGCTGCTCAAG GGCCACGACGCACCCAAGGACCGTTTCTCGCGGCTGCTCGACCGGCTGTTCGGCGGCTGGCTGTTCGCCCCCTTCAACCGCTTTTTCGAGAAAGCCAGCC ACGGCTACGTCGGCGCCGTGCGCCGGGTGCTGCGCGGCGGTTCCATCGTACTGGTGCTCTATGTGGTGCTGCTCGGCCTGACCGGCCTGGGCCTGGTGAA GACGCCGACCGGCTTCGTGCCGCCCCAGGACAAGCAGTACCTGGTGGCCTTCGCCCAGTTGCCCGATGCCGCCACCCTGGATCGCAGCGAAGAGGTCATC CGCCGCATGTCGGCCATCGCCCTCAAGCATCCGGGCGTGGAAAGCACCGTGGCCTTCCCCGGTCTGTCCATCAACGGCTTCACCAACAGCCCCAACAGCG GCATCGTCTTCGTGACCCTGAAGCCCTTCGAGGAGCGCCGTGATCCCTCGTTGTCCGCCGGTGCCATCGCCGCCCAGCTGAACGGCGAATTCGCCGCCAT CCAGGAATCCATCATCGCCATCTTCCCGCCGCCGCCGGTGCAGGGACTGGGCAGCATCGGCGGCTTCCGCCTGCAGGTGGAGGACCGCGGCAACCTGGGT TACGAAGAACTCTACGCCCAGACCCAGAGCGTGCTGGCCAAGGCCCGGCAGCTGCCGGAACTGGCGCCCGAGTCGCTGTTCACTAGCTACCAGGTCAACG TGCCGCAGATCGATGCCCACATCGACCGCGAGAAGGCCAAGACCCACGGGGTGCCCATCGACGCCATCTTCGACACCCTGCAGGCCTACCTGGGCTCGGT CTACGCCAACGACTTCAACCGCTTCGGCCGTACCTTCCAGGTCAACGTCCAGGCCGACCAGCGCTTCCGCCTGGAACCCGAGCAGATCGGCCAGCTCAAG GTGCGCAACGACCGCGGCGAGATGGTGCCCCTGTCCACCTTCGTCAAGGTGAGCGATACCGCCGGTCCCGACCGGGTGATGCACTACAACGGCTTCCTCA CCGCCGAGATCAACGGCGCGCCGGCGCCAGGCTACAGCTCCGGCCAGGCCCAGGCGGCCATCGAGGGGCTGCTCAAGCAGGAATTGCCCAACGGCATGAC CTTCGAATGGACCGAGCTGACCTACCAGCAGATCCTCTCCGGCAATACCGCCCTGCTGGTCTTCCCGCTCTGCGTGCTCCTGGCCTTCCTGGTGCTGGCC GCCCAGTACGAGAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCCATGACCCTGCTCTCGGCCATCACCGGGGTGATCCTGGCCGGCAGCGACA ACAACATCTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCCATCCTCATCGTCGAGTTCGCCAAGGACCAGCAGGCCACCGG CAAGGACCGCGTCGCCGCGGTGCTGGAGGCCTGCCGCCTGCGCCTGCGACCCATCCTGATGACCAGCTTCGCCTTCATCATGGGCGTGGTGCCCCTGGTG ACCTCCACCGGCGCCGGCGCCGAGATGCGCCACGCCATGGGCGTCGCGGTGTTTTCCGGGATGCTCGGGGTGACCTTCTTCGGTCTGCTGCTCACGCCGC TCTTCTATGTGCTGGTACGCGCCTTCGTGGAGCGTCGCCAGGCTCGCTCCGCCGTTGCCCAGGAGGCCCAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCTTTCGCTCCCCTGCTGCTGGCGCTGGCGGTCTCCGCCTGCGCCGTCGGCCCGCACTACCAGGCGCCTGAGCAGGCACCCGTCCAGCTCAAGGCCAG CCAGCAGCCCAGCGCCTACGACCAGGGCCGCTTCGAGGCGCTCTGGTGGCGCCAGTTCGAGGACCCGACCCTCAACGCCCTGGTGGCCAGCAGCCTGGAC GGCAACCGCGAATTGCGCGCCGCCTTCGCCCGGCTGCGCGCCGCCCGCGCCCTGCGCGACGACGACGCCAACGACCTCTATCCGACGGTCACCAGCCGTG CCAGCAGCCAGCTCGGCAAGGCCCAGCAACCCGGTTTCACCGAGGAACGGGTCAACAGCGACCGCTACGACCTGGGTCTGGACATGGCCTGGGAGCTGGA CCTGTTCGGGCGCGTCCGCCATGCCCTGGAAGCCAGCGATGCCCGCGCCGAGGCCGCGGCGTCGGATCTCGCCGCGCTGCAGGTCAGCCTGATCGCCGAG
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| Amino Acid Sequence |
>transporter
MNFSQFFIRRPIFAAVLSLIILIGGAISLFQLPISEYPEVVPPTVVVRATFPGANPKVIGETVAAPLEQAMNGVEHMLYLSSQSTADGKLTLTITFALGT NLDTAQVQVQNRVTRTLPKLPEEVQRLGVTADKASPDLAMVVHLTSPDQRYDMLYLSNYALINVKDELARLDGVGDVQLFGMGDYSLRVWLDPDKVASRG LTASDVVTAIREQNRQVAAGALGAPPAPGSTSFQLAINTQGRLVDEEEFANIIVRAGSDGQITRLRDIARIELGSNQYALRSLLNNQPAVAIPIFQRPGS NAIDLSNQVRAKMAELKQSFPQGMDYEIVYDPTIFVRGSIEAVVHTLFEAIILVVLVVILFLQTWRASIIPLAAVPVSLIGTFAVMHAFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLDPVAATRRAMGEVTGPIIATALVLCAVFVPTAFISGLTGQFYRQFALTIAISTVISAFNSLTLSPALAAVLLK GHDAPKDRFSRLLDRLFGGWLFAPFNRFFEKASHGYVGAVRRVLRGGSIVLVLYVVLLGLTGLGLVKTPTGFVPPQDKQYLVAFAQLPDAATLDRSEEVI RRMSAIALKHPGVESTVAFPGLSINGFTNSPNSGIVFVTLKPFEERRDPSLSAGAIAAQLNGEFAAIQESIIAIFPPPPVQGLGSIGGFRLQVEDRGNLG YEELYAQTQSVLAKARQLPELAPESLFTSYQVNVPQIDAHIDREKAKTHGVPIDAIFDTLQAYLGSVYANDFNRFGRTFQVNVQADQRFRLEPEQIGQLK VRNDRGEMVPLSTFVKVSDTAGPDRVMHYNGFLTAEINGAPAPGYSSGQAQAAIEGLLKQELPNGMTFEWTELTYQQILSGNTALLVFPLCVLLAFLVLA AQYESWSLPLAVILIVPMTLLSAITGVILAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKDQQATGKDRVAAVLEACRLRLRPILMTSFAFIMGVVPLV TSTGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPLFYVLVRAFVERRQARSAVAQEAQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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