Pseudomonas sp. MOIL14HWK12:I2, PSK12I2_RS0101970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_1.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATCGGCTACTGGAACATCCTGCCGCAGCGCTTCGTCGATGCCCCGGCCTCGGCGACCCCGCAAGACAGCGCCATCGATGGCTATGCCCTCAATACCCGG ACGATTCAGTATCGCCTGGACGGCAAGATCCAGTACGAACTCAAGGCCGAGCGCAGCGAACACGTCAAGGCGACCGACGTCACCCTGGTGACCCGCCCCG ACATGCTGGCCTTTCGCGGTACCGACTATCCCTGGCACATTCGCAGTGCCCGCGCCGAGGTCGCCCCCGGTGGCAGTCAGGCGGAGCTGATCGATGACGT GCGCGTCGAGCGTACCGATGAGAAAGGCCGCCCGGTGGTGTTGACCACCACCCGCATGACCGTCTTTCCTGACAAACAATATGCGCAAACCGAGCAAGCC GTTAGAATCGAGGCCGCCAATGGGGTGACCACGGCCAATGGCATGAAAGCGTATCTAGAAGACGGCAGAATGCTCCTGCTGTCCAACGTAAGAGGCCAGC
|
|
| DNA Sequence for Gene |
>PSK12I2_RS0101970
ATGAGGTTCGTTAAAACCCTCCCCTTCCTGTTCACCCTCGGCGCCACCTTTGGCAGTGCCGCGGCTTGGGCCCTGCCGACCGATCGCACCCAGCCGATCC GCGTGCAGGCCGATAGCGCCGAGCTCGATGACAAGCAGGGCGTGGCCGTGTACCGCGGAGACGTGGTCATCACCCAGGGCAGCATGAAGATCACCGGCAA CACGGTGACCCTGACCCAGGACAACCAGGGCAACATCAAGGTCGCCACCGCAGTGGGCAAACCGGCCTACTACGAGCAGAAGCCCTCGGCGGACAAGGAC ATCGTCAAGGCCTATGGTCTGACGATCCAGTATTTCGCCCAGGAAAATCGCATCATCCTGATCGATCAGGCCAAGGTGGTCCAACAGGGCAACACCTTCG AAGGCGAGAAGATCGTCTACGACACCCAGCGCCAGATCGTCAACGCCGGGCGTGCCAACGGCAGCAAGGTCACCACGCCGCGGCCGCGGATCGACATGGT CATCCAGCCCAAGGATCAGCAGCAGTCGGGGCAGGGACAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGGTTACGCTCAAAGCCCAGCATCTGGCCAAGAGCTACAAGGGTCGTCAGGTCGTTCGCGACGTCAGCGTCAGCATCGACAGCGGGCAGATCGTCGGCCT GCTCGGTCCGAACGGCGCCGGCAAGACCACCTGCTTCTACATGATCGTCGGCCTGGTCAAGGCCGATCAGGGTCGCGTGCTGATCGACGACCAGGACGTC ACCGCCCTGCCCATGCATGGCCGTGCCCGTGCCGGGATCGGCTACCTGCCCCAGGAAGCCTCGATCTTTCGCAAGCTGACCGTAGCCGACAACATCCTCG GCATCCTGGAAACCCGCAAGGACCTGGACAAGGCCGGCCGGCTGCGTGAGCTGGAGAGCCTGCTGCAGGAATTCCACATCACCCACATCCGCGACAACCG CGGCATGAGCCTGTCGGGTGGCGAGCGGCGCCGTGTCGAGATCGCCCGCGCCCTGGCCACCGCGCCCAAGTTCATCCTGCTGGACGAACCCTTCGCCGGC
|
|
| Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRFVKTLPFLFTLGATFGSAAAWALPTDRTQPIRVQADSAELDDKQGVAVYRGDVVITQGSMKITGNTVTLTQDNQGNIKVATAVGKPAYYEQKPSADKD IVKAYGLTIQYFAQENRIILIDQAKVVQQGNTFEGEKIVYDTQRQIVNAGRANGSKVTTPRPRIDMVIQPKDQQQSGQGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|