Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_1.2_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACGAGGCCTTCATGGATCCCACCCCGGGGGCAAGCCTTGCGCCCTTCAGCGATCTGCCCGGCCTGATCGTGCTGCGCTCCTTTGGCAAATTCTTCGGAC TGGCCGGGATGCGGCTGGGCTTCGTGCTGGCGGCGCCGAGCCTGCTGGCGCAGCTGGACGAGCAGGTGGGGCCCTGGACGGTGAACGGCCCCAGTCGTTA TCTCGCCCGGCAGCTGCTGGCCGATCAGTCGGGCCAGCAGCGTCAGCGCGAGGCGTTGCTCGAGGCCGGCGAGCGGCTGGCCGCGGTGCTCGCTAGCCAT GATCTGCTGCCCAGCGGCGGCTGTGCCCTGTTTCAATTGCTGCAGCGCCCGGATGTCGCGGCTCTGCACGAACACCTGGCCCGCCAGGCCATCCTGACCC GTCTGTTTCCCGCGCTTGGCGCTCTAAGATTCGGTCTGCCCGGCGACGAGGCCGGCTGGCAGCGCCTGGACCAGGGCCTCGCCAGCTACCGGAGTCCCCT
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DNA Sequence for Gene |
>PSK12I2_RS0100850
ATGAGTACGCTGATGGTGCAGGGCACCACCTCCGACGCCGGCAAGAGCACCCTGGTGGCCGCCCTGTGCCGCTGGCTCTATCGCCAGGGCGTGGCCGTGG TGCCCTTCAAGCCGCAGAACATGGCGCTCAACAGCGCCGTGACCGCCGATGGCGGCGAGATCGGCCGCGCCCAGGCGGTTCAGGCCCAGGCCTGTGGCCT GGCGCCCCATACCGACATGAATCCGGTGCTGCTCAAGCCCAATACCGATGTCGGCGCCCAGGTGATCATCCATGGTCGCGCCGTCACCAGCATGGATGCC AAGGCCTATCACGCCTACAAACCGGTGGCGCGGGAAGCGGTGCTGGCCTCCCATGCGCGATTGGCCGAGCGCTATCAGGTGGTGCTGGTGGAAGGCGCCG GTTCGCCGGCCGAGATCAACCTGCGCCAGGGCGACATCGCCAACATGGGCTTCGCCGAGGCGGTGGACTGCCCGGTGCTGCTGGTGGCGGACATCGACCG CGGCGGCGTCTTCGCCCATCTGGTCGGCACCCTGGACCTGCTCGAACCCAGCGAACAGGCGCGCGTCGCCGGCTTCATCATCAACCGCTTCCGTGGCGAC CTGGCCCTGCTGCAACCCGGGCTGGACTGGCTCGAAGCCCGTACCGGCAAGCCGGTGCTCGGCGTGCTGCCCTATCTGCACGACCTGCACCTGGAAGCCG AGGATCGCCTGGCCACCGGCCAGGTCGCCAAGCAGGGACCGCGCCTGCGGGTGGCGGTGCCGGTGATGCCGCGGCTGAGCAACCACACCGATTTCGATCC CCTGCGCCTGCATCCCCAGGTGGAATTGCTGTTTGTCCGCCAGGGCGAGGAATTGCCCGCTGCCGACCTGATCATCCTCGGCGGCTCCAAGAGCGTGCGC GGCGACCTGGCCTTCCTGCGCGCCCAGGGCTGGGATACGGCCATCGCCCGTCACCTGAGATACGGGGGACGGGTGCTGGGCATCTGCGGCGGCTTCCAAA TGCTTGGCGAGCGGATCGCCGATCCCCTCGGGCTGGAAGGCGCGCCGGGTGACAGCGCCGGTCTGGGCCTGTTGGCCATGACCACCGAACTGGCGGCGGA AAAGCAGCTGCGCAACGTGCACGGCTGGCTGAACGACGGCAATGCCGAGGTGGCCGGCTACGAGATCCATGCCGGCGTCAGCCAGGGCCCGGCCCTGGAG CGCCCGGTACTGCGCTTCGCCGATGGCCGCGTCGACGGCAGCCTCAGCGACGACGGCCAGGTGCTGGGCACCTACCTGCACGGCCTGTTCGAGTCGCCAG CCGCCAGCGTCGCCCTGCTGCGCTGGGCCGGCCTGGCCGAGCCGCGGCAGCTGGACTACCACGCCCTGCGCGAACGGGATCTGGAGCGCCTGGCCGATCT GGTCGAACACCACCTGGACACCGGGCGCCTGCGCGCCCTCTGCGAGCTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGCGCGAATTCATTCTCGGTGGCGCGCGCTCCGGCAAGAGCGCCCTGGCCGAGCGCCTGGCCGCCGAGTCCGGCCTTGCCGTCACCTATATCGCCACTG CCGGTGGCAGCGATGCCGAGCTGGCGCGGCGCATCGAGCGCCATGCCGCCCGCCGGCCGGCGCACTGGGCGCTGGTGGAAGAACCCCTGGCGCTGGCCGA ACGTCTGGCGGCCCTGGCGGCGCCGGAGCGCTGCCTGCTGGTGGACTGCCTGACCCTCTGGCTGACCAATCTGCTCCTGCTCGACGATCCCCGGCGCCTC GATCGTGCCTGCGCGGAGCTGCTCGAGCTCGTGCCGCAGTTGCCCGGTCACCTCATCTTCGTCAGCAACGAGACCGGCCTGGGCGTCGTCCCGCTGGGCG CGCTGACCCGCCGTTACGTCGATGCCGCCGGCGAATTGCACCAGGCCCTGGCCGCGCGCTGCGAGCGCGTGGTGCTGACCGTCGCCGGTCTCCCCCTGAC
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Amino Acid Sequence |
>cobyric acid synthase
MSTLMVQGTTSDAGKSTLVAALCRWLYRQGVAVVPFKPQNMALNSAVTADGGEIGRAQAVQAQACGLAPHTDMNPVLLKPNTDVGAQVIIHGRAVTSMDA KAYHAYKPVAREAVLASHARLAERYQVVLVEGAGSPAEINLRQGDIANMGFAEAVDCPVLLVADIDRGGVFAHLVGTLDLLEPSEQARVAGFIINRFRGD LALLQPGLDWLEARTGKPVLGVLPYLHDLHLEAEDRLATGQVAKQGPRLRVAVPVMPRLSNHTDFDPLRLHPQVELLFVRQGEELPAADLIILGGSKSVR GDLAFLRAQGWDTAIARHLRYGGRVLGICGGFQMLGERIADPLGLEGAPGDSAGLGLLAMTTELAAEKQLRNVHGWLNDGNAEVAGYEIHAGVSQGPALE RPVLRFADGRVDGSLSDDGQVLGTYLHGLFESPAASVALLRWAGLAEPRQLDYHALRERDLERLADLVEHHLDTGRLRALCEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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