Pseudomonas oleovorans MOIL14HWK12, PSOK12_RS0113060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oleovorans MOIL14HWK12 PsoK12DRAFT_scaffold_0.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGTGCTCGGCGTGCTCTACGAAAGCTATGTCCACCCCCTGACCATCCTCTCGACGCTGCCGTCGGCCGGGGTAGGGGCCTTGCTGGCCATCCAGCTCA CCGGTGGCCAGTTCAGCCTGATCTCCATGCTCGGGCTGTTCCTGCTGATCGGGGTGGTGAAAAAGAACGCCATCATGATGGTGGACCTGGCGCTGCAGCT GGAACGCCAGCAGGGCCTGACGCCCGAGGAGGGCATCCGCCAGGCCTGCCTGCTGCGCCTGAGGCCCATCCTCATGACCACCATGGCCGCCATTCTCGGC GCCGTGCCGCTGCTGATCGGCGATACCGAGGGCGCCGAGATGCGCCAGCCGCTGGGCCTGGTGATCGTCGGCGGACTGGTGCTGAGCCAGATTCTCACGC TCTACACCACTCCGGTGGTCTATCTCTATTTCGAACGCCTGCGCCGCCGCGTCAATCGCTGGCGCGGCATCCGTACCGACGCTGCCCTGGATACGCCGCT
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| DNA Sequence for Gene |
>PSOK12_RS0113060
ATGACCCCAACCCTGCGCCTGCCGACGCTGACCCTGGCTCTGCTGCTGGCCGGCTGTACCCTGGGCCCGGACTACCAGCGGCCGACCACCACGGTGCCGG TCGCCTATCGCCACGCCGAAGGCTGGCAGGCGGCGGCGCCCAAGGACCTGGAGATCCGTGGCGACTGGTGGCGGCGCTATGACGATCCGACCCTCGACCG TCTGATGGTCCAGCTCAACCAGCGCAACCAGAGCCTGGCCCAGGCCGAGGCGACCTATCGGCAATCCCTGGCCTTGGTCAGCCAAGCACGGGCTTCGCTG TTCCCGACGCTCTCCAGCAGCCTGGGCGCCACCCGCTCCGGGCGCGGGGGTGGTTCGGGCAGCAACACCGTCATCCGCAACTCCAATGGCACCAGCAGCA CCGTCAGCAGCGGTGGCTCCAGCACCATCAGCAACGCCTACGACGCCAGTCTGGGGGTGAGTTGGGAGCTGGATCTCTGGGGCCGCGTCCGGCGCCAGGT GGAGGCGGATCGGGCCTCTGCCCAGGCCAGCGCCGCGGAGCTCGCGGCCACCCGCCTGAGCCTGCAGACGCAACTGGCGACCAACTACCTGCAACTGCGC GTACTGGACGCCCAGCAGCGACTGCTCGACGCCACCGTGGCCGCCTACGAGCGATCCCTGCGCCTGACCCAGAATCAGTACCGCGCCGGCATCGTCACCC CGGCGGATGTGGCCCAGGCCACCACCCAGCTGAAGAGCACCCAGGCCGACGCCATCGACCTCAGGTATCAGCGTGCCCAGCTGGAAAACGCTATCGCGGT GCTGGTCGGCGAGGTCCCGGCCAATTTCCAGCTGGCCGCGGTCAAAACGATTCCCGAGTTGCCGCCGCTGCCGAGCGCCGTGCCCTCGACGCTGCTCGAA CGTCGTCCGGACATCGCCCAGGCCGAGCGCCAGGTCATGGCCGCCAATGCCGCCATCGGCGTCGCCGAAGCCGCCTATTATCCCGACCTGACCCTGAGTG CCAGCGGTGGCTACAGCGCCAGCCAGTGGGGCAACCTGATCAGCACGCCGAATCGCTTCTGGTCGATCGGGCCGTCCTTTGCCCTGTCGCTGTTCGATGG CGGCCTGAGACGCGCTCAGGTGGAGTCCGCCGAGGCCAGCTACGACGCCAGCGTCGCCGGTTATCGCCAGACCGTGCTCGCGGGCTTCCGCGAGGTGGAA GACTATCTGGTGCAGTTGAGTACCTACAGCGACGAAGCCGGCGTGCGCCAAGAGGCCCTGGATGCCGCGCGCCGCGCCCTGCAACTGGCCGAGAACCAGT ACCAGGCCGGCCTGATCGGCTATCTCGACGTGGTCACCCTGCAGACCACCGCCCTGAGCAACGAGCGCACCAACCTGACCCTGCTCGGCAGTCGCCTCAG CACCAGCGTCCAGCTGATCGCCGCGCTTGGCGGTGGCTGGGATGGCAATCTCACGCCGCCCGCACCGCCACGGCGGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTGAGCAGGAAAAAGCCGCGCAGATTCTGGATTGTCGAGGCTGTGGGCGCGCCTTTGGGCGAGGCACGACGGCCGATCACCGGCGTGCCGGAGCGGAT GGAGCTGAACGCTTGCGTGGATAGCCCCCTCTCCCTGCGGGAGAGGGCTGGGGTCAGGGGGCCCTTTGCCGCGAAGTCCCCAGTGGAACAGGCTGCGCCG TTTTCCACGCTACTGCACGGGAGGGCAACGTCACGCCCCAGCGGCCCTGACGGCGGGCACAAAAAAGCCGGGCGATGGCCCGGCTTTTTCACGACTGGCG CTTAGTTGGGGAAGAGTTCGCCCAGCTTCATGCTCAGCATCATGTTGCCTTCGACGCGCAGCTTGCCGGACATGAAGGCCTGCATGCCGTCGGTCTCGCC GCTGACGATGCCGGCCAGGGTGGCCTGGTCCATGATCAGGGTGCAATCCGGGTCGGCGGCGTCGCCCTGCTGGACGTCGCAGGTGCCGTCCTTGACGACC
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| Amino Acid Sequence |
>RND transporter
MTPTLRLPTLTLALLLAGCTLGPDYQRPTTTVPVAYRHAEGWQAAAPKDLEIRGDWWRRYDDPTLDRLMVQLNQRNQSLAQAEATYRQSLALVSQARASL FPTLSSSLGATRSGRGGGSGSNTVIRNSNGTSSTVSSGGSSTISNAYDASLGVSWELDLWGRVRRQVEADRASAQASAAELAATRLSLQTQLATNYLQLR VLDAQQRLLDATVAAYERSLRLTQNQYRAGIVTPADVAQATTQLKSTQADAIDLRYQRAQLENAIAVLVGEVPANFQLAAVKTIPELPPLPSAVPSTLLE RRPDIAQAERQVMAANAAIGVAEAAYYPDLTLSASGGYSASQWGNLISTPNRFWSIGPSFALSLFDGGLRRAQVESAEASYDASVAGYRQTVLAGFREVE DYLVQLSTYSDEAGVRQEALDAARRALQLAENQYQAGLIGYLDVVTLQTTALSNERTNLTLLGSRLSTSVQLIAALGGGWDGNLTPPAPPRRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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