Pseudomonas oleovorans MOIL14HWK12, PSOK12_RS0110475 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oleovorans MOIL14HWK12 PsoK12DRAFT_scaffold_0.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGGTCCTCGATCTCTTCTCCGGCCTCGGCAACTTCGCCTTGCCGCTGGCGCGGCAGGCGGCGGCCGTCACCGGGATCGAAGGGGTCGCGGCGATGACA TCCCGGGCAATACAAAATGCGCGTGACAACGGCATCGGCAACGCGCACTTTCTACAGGTGGACCTGTCGAACCCGCTACCCGCCGATCTGGGCAGCCATT CGCTGGCGCTGCTGGATCCGCCGCGCGACGGTGCGCTGGAAGTGGTCCGGCAACTCAGCGGCCTGGGTATCGGGCGACTGGTCTATGTCTCCTGCAATCC GGCCACCCTGGCGCGGGACGCGGGAGAGCTGGTCCGACAGGGCTATCGCATGACAAGAGCGGGCATTCTCGACATGTTCCCGCAGACCGCCCATGTGGAA GCCATGGTGTTGTTCGAAGCGGGCGGGATGCCCGGGTAACGACGGCTCGCCAACCGATGCGAGCCAATCCGGCGAAGGCACCGCCGTGAGGAAGGGGTAG
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| DNA Sequence for Gene |
>PSOK12_RS0110475
|relA
ATGGTACAGGTCAGAGCGCATCAGCCAGTCAACGTCGATGGCAGCATCAACCTTCACGCCTGGCTGGATCACATCCAGAGCGTGGATCCGAATCTCGATC GCGAGACCTTGCTGGATGCCTGCGGCTTCGCCCGCACGGCGGAGGAGAATTCCGGCCAGGTCGAGCACACCTGGGCGGAGGGCACCTCCAGTTTCCATAC CGGGCTGGAGATGGCCGAGATCCTGGCCGATCTCAAGCTGGATCAGGACAGCCTGATCGCGGCCATCGTCTACCGGGCGGTGCGCGAGGGCAAGGCGACC CTGGAGTCGGCCGCGGAGCATTTCGGGCCGGTGGTGGCCAAGCTGATCGAAGGCGTGCTGCGCATGGCGGCGATCAGCGAGAGTCTCAATCCGCGCAAGT CCATGGTGCTGGGCAGCCAGACCCAGGTCGACAACCTGCGGCGCATGCTGGTGGCCATGGTCGACGACGTGCGCGTGGCCCTGATCAAGCTGGCCGAGCG CACCTGCGCCATCCGTGCGGTCAAGAACGCCACCGAAGAACGCCGCAACCGGGTGGCTCGCGAGGTGGCCGACATCTATGCACCCCTGGCCCACCGCCTG GGCATCGGTCATATCAAGTGGGAGCTGGAGGACCTGTCCTTCCGTTACCTGGAGCCCCAGCAGTACAAGCAGATCGCGACCCTGCTGCACGAGCGGCGGC TGGATCGCGAGCAGTACATCGCCGATGTCATGCAGCAGCTGCGTGACGAACTCACCGCCACCGGTATCAAGTCCGACATCAGTGGCCGGGCCAAGCACAT CTATTCCATCTGGCGGAAGATGCAGCGCAAGGGCCTGGAATTCAGCCAGATCTACGACGTGCGCGCGGTGCGGGTGCTGGTACCCGAGGTGCGTGACTGC TACACCGCGCTGGGTATCGTGCATACCCTGTGGCGGCACATTCCCCGCGAGTTCGACGACTATATCGCCAACCCGAAGGAGAACGGCTACCGTTCCCTGC ACACCGCGGTGATCGGTCCTGAGGGCAAGGTGCTGGAGGTGCAGATCCGCACCCACGCCATGCACGAAGAGGCCGAACTGGGGGTCTGCGCCCACTGGCG CTACAAGGGCACCGATGTCAAGTCGGCCTCCAACCACTACGAAGAGAAGATCTCCTGGTTGCGCCAGGTGCTGGAATGGCACGAGGAGCTGGGCGACATC GGCGGCCTGGCCGACCAGTTGCGCGTCGACATCGAGCCGGACCGGGTCTATGTCTTCACTCCCGACGGCCACGCCATCGACCTGCCCAAGGGCGCGACGC CGCTGGACTTCGCCTACCGGGTGCACACCGAGATCGGCCACAACTGCCGTGGCGCCAAGATCAACGGCCGCATCGTGCCGCTGAACTACCAGCTGCAGAC CGGCGAGCAGGTGGAGATCATCACCGGCAAGCAGGGCTCGCCCAGCCGCGACTGGCTCAACCCCAACCTCGGCTACGTCAACACCTCGCGGGCCCGGGCC AAGATCGTCCACTGGTTCAAGTTCCAGGCGCGTGACCAGAACGTTGCCGCCGGCAAGGCCATGGTCGAGCGCGAGTTGTCGCGCCTGGCGCTGCCGCCGG TGGACTTCAATACGCTGGCCGAGAAGGTCAACTACAAGGGTGCCGAGGACATGCTGGCGGCCCTGGGCGCCGGTGACCTGCGCCTGGCCCATGTGATGCA CGCCGCCCAGCAGCTGGTGGAGCCGGACAAGGGCGTCGATACCCTCGATCTCCTGCCGCGCAAGCCGACCAACAAGCCAGGCAAGCGCGGCGATGTGCAG ATCCAGGGGGTGGGCAACCTGCTCACCCAGATCGCCGGGTGCTGCCAGCCGGTGCCGGGCGACGCCATCGTCGGCTACATCACCCTGGGGCGCGGCGTGA CCATCCACCGGCAGGACTGCGCCAACGCCCTGCAGCTGGCCAGTCGCGAGCCGGAGCGGACCATTCAGGTGAGCTGGGGCCCGGTGCCGGTGCAGACCTA TCCGGTCGATATCGTCATCAAGGCCTTCGACCGCTCCGGTCTGTTGCGCGATGTCTCGCAGATCCTGCTCAACGAGCGGATCAACGTGCTGGCGGTGAAC ACCCGCTCCAATCGCGAGGAAAACACCGCCAACATGCTGCTGACCATCGAGATCCCCGGCCTGGACGCCCTCGGTCGTCTGCTCGGACGGATCTCCCAGC TGCCCAACATCATCGAAGCCCGGCGCAATCGCGCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGTGACGATGCCCCCACGAGGCGCCTCCTGGCGCCTCGTTCTTTTTCCAGTGACAGGATTCACCCAATGTACAAGCTCGACGACCTGCTGCACCTCA TGGCCCGGTTGCGCGACCCCCAACACGGTTGCCCCTGGGACCTGCGCCAGGACTACGCCAGCATCGTGCCCCACACCCTGGAAGAGGCCTACGAGGTCGC CGACGCCATCGCCCGGCGGGATTTTCCGCAGCTGCGCGACGAGCTGGGCGATCTGCTGTTCCAGGTCGTCTACTACAGCCAGCTGGGGCGCGAGGATGGC CATTTCGACTTTGCCCAGGTGGTGGATGGCATCACCCGCAAGCTGGTGCGGCGCCATCCCCATGTCTTTCCCGATGGCGACCTGCATGGCCCGCTGGACC TGCCGCGGCTGGACGAGCCGACCATCAAGCGCCGCTGGGAAGAGATCAAGGCCGAGGAGCGGGCGGAAAAGGCCGCGGCGCCCGAGCAGCTGTCGCTGCT
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MVQVRAHQPVNVDGSINLHAWLDHIQSVDPNLDRETLLDACGFARTAEENSGQVEHTWAEGTSSFHTGLEMAEILADLKLDQDSLIAAIVYRAVREGKAT LESAAEHFGPVVAKLIEGVLRMAAISESLNPRKSMVLGSQTQVDNLRRMLVAMVDDVRVALIKLAERTCAIRAVKNATEERRNRVAREVADIYAPLAHRL GIGHIKWELEDLSFRYLEPQQYKQIATLLHERRLDREQYIADVMQQLRDELTATGIKSDISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLVPEVRDC YTALGIVHTLWRHIPREFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRYKGTDVKSASNHYEEKISWLRQVLEWHEELGDI GGLADQLRVDIEPDRVYVFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKINGRIVPLNYQLQTGEQVEIITGKQGSPSRDWLNPNLGYVNTSRARA KIVHWFKFQARDQNVAAGKAMVERELSRLALPPVDFNTLAEKVNYKGAEDMLAALGAGDLRLAHVMHAAQQLVEPDKGVDTLDLLPRKPTNKPGKRGDVQ IQGVGNLLTQIAGCCQPVPGDAIVGYITLGRGVTIHRQDCANALQLASREPERTIQVSWGPVPVQTYPVDIVIKAFDRSGLLRDVSQILLNERINVLAVN TRSNREENTANMLLTIEIPGLDALGRLLGRISQLPNIIEARRNRAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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