Strain | Pseudomonas oleovorans MOIL14HWK12 PsoK12DRAFT_scaffold_0.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCCGTCCGGGCCCGGGCCCGGCGTAGCACGAGACCCAGACGATGGCAGACAACCCAGAAGAACAAGCCCTGGCGGACGAGTGGGCCGCGGCCCTGGCCGA AGCCGGTGACGCCAGTCAGGACGACATCGACGCCCTGATGGCCCAGGGTACCCAGGTCGAAGCCCCCAAGCCGCCCAAGGCGCCGGTGGAAGAATTTGGT CAGAGCAGTGGGGGGTTGGCAGTGAGCGGCATGGAAGGGCCCAACCTGGATGTGATCCTGGACATCCCGGTGACCATCTCCATGGAGGTCGGCCACACCG ACATCTCCATCCGCAACCTGCTGCAACTCAACCAGGGCTCGGTCATCGAGCTCGACCGTCTGGCTGGCGAGCCGCTGGACGTGCTGGTGAATGGTACGCT GATCGCCCATGGTGAAGTGGTGGTGGTGAACGAGAAGTTCGGGATCCGCCTGACCGACGTCATCAGCCCCACGGAACGTATCAAGAAGCTGCGGTGATCC
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DNA Sequence for Gene |
>PSOK12_RS0108975
ATGAAGAGTCTGCTCCTGCCGCTGGGTCTCCTGCCCCTGACCGCGCGTGCCGCCGAAGCCACCTCGCCGGGGCTGGATGTGGGGGCGCAGGTCGGTCAGT TGCTGCTCGGTCTGCTGTTGGTGATCGCGCTGATTCTCGGCCTGGCCTGGCTGGTGCGCCGGGTGCAGCAGCAGGGTCCGCGCGGTCAGCAGGTGATCAA GGTCATCTCCACCCAGCACCTGGGCCCGCGCGAGCGGCTGGTGCTGGTTCAGGTCGGCCAGGAGCAGTTGCTGATCGGCGTCGCCGGCGGACGGATCACG CCGCTGCACAGCCTGCGCGAGCCGGTGCGACCGGGCGAGACCGAGGCGCCGGCGCCGGAATTCGCCCAGCGCCTGCTGGAACTCATCAGCCGCGATCCCA AGGCGAAACCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCTCTTCGCGTCTCCCGGCCAACCTCGGGCGCACCCTGGGCTGGCTGCTGGGCCTGGCCGTGCTGCTGTTCGCGCCCCTGGCGCTGGCGCAGCAGGCCGG GCAGGCCAATCCGCTGTCGATCCCGGCCATTACCCTGAGCACCAACGGCCAGGGGCAGCAGGAGTATTCGGTCAGCCTGCAGATCCTGCTGATCATGACG GCGCTGAGCTTCATCCCGGCGTTCGTCATGCTGATGACCAGCTTCACCCGCATCGTCATCGTCTTCGCCATCCTGCGCCAGGCGCTGGGCCTGCAGACCA CGCCGTCCAACCAGGTGCTGGTGGGCATGGCGCTGTTTCTCTCGCTGTTCATCATGGCGCCGGTGTTCGACCGCATCAACAGCACCGCCGTGCAGCCCTA TCTGAACGAACAACTCAGCGCCCAGGACGCCATCGCCCGGGCGCAGGTGCCGATGAAGGACTTCATGCTGGGGCAGACCCGGCAATCGGACCTGGACCTG
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Amino Acid Sequence |
>flagellar assembly protein FliO
MKSLLLPLGLLPLTARAAEATSPGLDVGAQVGQLLLGLLLVIALILGLAWLVRRVQQQGPRGQQVIKVISTQHLGPRERLVLVQVGQEQLLIGVAGGRIT PLHSLREPVRPGETEAPAPEFAQRLLELISRDPKAKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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