Pseudomonas brassicacearum 51MFCVI2.1, PSBVI21_RS0127815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas brassicacearum 51MFCVI2.1 PsbVI21DRAFT_scaffold_4.5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCAACTTTCCGCGGCGCAACCGGATCATCAGCGGCTTGTCCCTGGGCGTGCTGGTGGTAGAGGCCAGTGTCGCCAGCGGCTCACTGATCACCGCGCGA CTGGCGGCGGAACAGGGTCGCGAGGTGTACGCCATTCCTGGATCGATCCATCACCCCGGGGCCCGAGGCTGCCATCAACTGATCCGCGACGGTGCGGCGC TGGTGGAAACCGTCGAGCATATCCTCGAAGCGCTGCGCGGTTGGCAGCGGTTGCCGCCGGCCTCGGAGCCCGTGCCCGTGACCCATCCGCTGCTGCGCCT GCTGCATGCCGCGCCGCTGAGCAGTGAGGCGCTGGCCGACGCCAGTGGCTGGGGCTTGCCCAAAGTGCTGGCGGCGTTGACCGAACTGGAGATGGAAGGA CGCGCCACCTGCGACAACGGACGCTGGTTTGCGCGCTAGGTTTTATGGGGAAGATCGGTAAACTGCCCACAGCCTTATTTGCGTTGCGGGAGAATCTTTC
DNA Sequence for Gene
>PSBVI21_RS0127815
ATGGTCAACAGTTGGCGTGTGCAACAAGCCGCGCGAGAAATTCGTGCCGGGGCGGTGATTGCCTATCCAACCGAAGCGGTCTGGGGCCTGGGTTGTGACC CATGGAACGAGGAGGCGGTGGAACGCCTGCTGGCGATCAAGTCGCGGCTGCCCGACAAAGGCCTGATCCTGGTGGCTGACAACATCCACCAGTTCGACTT CCTGTTCGAAGACTTCCCCGATACCTGGATGGACCGCATGGCCAGCACCTGGCCGGGGCCCAATACCTGGCTGGTGCCGCACCAGAACCTGCTGCCGGAA TGGATCACCGGGGTGCACGACACCGTCGCCCTGCGGGTCAGCGATCATCCCACCGTGCGCGACTTGTGCTCGCTGGTCGGGCCGCTGGTGTCCACCTCGG CCAACCCCCAAGGACGCCCGGCGGCGCGCACGCGGATTCGCGTCGAGCAGTATTTCCGCGGGCAGATCGACCTGGTGCTGGGCGGCAACCTGGGCGGGCG CAAGAACCCCAGCGTGATTCGCGACCTGGCTACTGGCAAGGTCGTGCGCCCGGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACCGCGTCATCGTTCATCGCGGGCAAGCCTTGCTCCCACAGAGTAAAACCTGTGGGAGATCTACCTCCACAGAGCATGGCCTGTGGGAACATGGCCTAC TTCCACAGAACATACTCTGTGGGAACATGGCCTACTTCCACAGAACATACCCTGTGGGAGCATGGCTTGCCCGCGATGAGGCCATCACAAACACCCTGTA ATTCAAGGCAGGAGAACGGTCGACCCCGTCGTGCGCCGCGCCGATAACTCGGTATGAGCCTTGGCCGCTTCCGCCAGTGGATAACGCTGGTTGATATCCA CTTTGATCTTGCCGCTGCTGATCATCCCGAACAGCTCGTCGGCCATGCGCTGCAGGTTTTCGGCGTTGTTGGCGTAAGTCGCCAGGGTCGGGCGGGTGAC GTAGAGCGAGCCCTTGGCCGCGAGGATCCCCAGGTTCACACCGTCCACCGCACCTGAAGCATTGCCGAAGCTCACCACCAGGCCACGGGGGGCGACGCTG
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVERLLAIKSRLPDKGLILVADNIHQFDFLFEDFPDTWMDRMASTWPGPNTWLVPHQNLLPE WITGVHDTVALRVSDHPTVRDLCSLVGPLVSTSANPQGRPAARTRIRVEQYFRGQIDLVLGGNLGGRKNPSVIRDLATGKVVRPD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site