Pseudomonas brassicacearum 51MFCVI2.1, PSBVI21_RS0125410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas brassicacearum 51MFCVI2.1 PsbVI21DRAFT_scaffold_3.4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAAGGACCGTGGCCTGTTTCGGGAAAACAGCGCAGGCCAGATCGAGAACATCTACAGCCTGAAAATCATCAACAAGACCCAACAGCGCCAGGATTACC ATCTGTCCCTGGTGGACGGCGACGGCTTCATCCTGCAAGGCAAGACCCAACTGAGCCTGGCCCCGGGGGAAATCGTCGATGTGCCGGTGTCGGTGGCGAT GCTCAGCGAACGGCCCGGCAAAGGCTCCCAGGAAATGACGTTCAAGGTCGCCGACAGCGACGAGCCAGGCATCTACAGCATCGCCAAGAGCCGTTTTGTC GCACCGATGAATCGTTGAAGCTTTAAGATGCCGGGCACCTGTGGGAGCGAGCGTGTGGGAGCAAAGCTTGCTCGCGAAGAACGATAACGCGACCTTACTG TTGATCCGTGTCGCCTGCGTCGCGAGCAAGCTTTGCTCCCACAGAATCTCCCACAGTTTAAAAAGCGCAAACCACGCGTCATTCAAGACTGGGCACCACC
DNA Sequence for Gene
>PSBVI21_RS0125410
ATGAAACGCTACGAGAAATTTGCCGACGACATCGCTGAACTGATCCGCTCGGGCATGCTGGGGCCAGGTCAGCGTGTGCCGTCGGTACGCTACGCCAGCC AGACCTACGGTGTCAGCCCGTCCACCGTGTTCCAGGCCTATTACCTGCTGGAACGACGCGGCATGATCCGGGCCCGGCCGCGCTCCGGCTACTTCGTCAA CACCCATGCGCCGAGCCCGTTTTCGGAGCCTGCGATCAGCAGCCAGGTGCACGAGTCCACCGAAGTCGACGTCAGTGAACTGGTATTTTCGGTCCTCGAC TCGATCAAGGACCCGGCCACCGTACCGTTCGGCTCGGCATTCCCCAGCCCGATGCTGTTCCCACTGCAACGGCTGTCCCGTTCGCTGTCCAGCGCAACAC GGGACATGGACCCGCGAATGGTGGTCACGGACATGTCGCCAGGCAACCCGCAACTGCGCCGACAGATCGCCCTGCGCTACATGGTCGGCGGGTTGATGCT GCCCATGGAGGAGCTATTGGTCACCAACGGCGCCCTGGAAGCGTTGAACCTGTGCCTGCAAGCCGTGACCGAGCCCGGCGATCTGGTGGCGATCGAAGCG CCAGCGTTCTACGCCAGCCTGCAAGTACTGGAGCGCCTGAAGCTCAAGGCCGTGGAAATTCCCGTGCACCCGCGCGACGGCATCGACCTGGACGTGCTGG CGCAGACACTGGAGCGCCATCCGATCAAGGCCTGTTGGTGCATGACCAGCTTCCAGAACCCCATGGGCGCGACCATGCCCGAGGAGCGCAAACAGGCGTT GGTAGAGTTGCTGCGCCGCCATCAGGTGCCGCTGATCGAGGACGACGTGTACGCCGAACTCTATTACGGCCAGCAGGCCCCCAAGCCTGCCAAGGCGTTC GACACCGAAGGCTTGGTGATGCATTGCGGTTCGTTCGCCAAGAGCCTGGCACCGGGTTATCGCATCGGCTGGGTCGCCGCCGGGCGCTACGCGCAGAAGA TCGAACGGCTCAAGCTCATGACCTCGTTGTGCGCCTCGATGCCGGCCCAGGCCGCCATCGCCGACTACCTGCAACACGGCGGCTACGACCGTCACCTGCG CAAACTGCGCTATGCCCTGGAGGAACAGCAAAGCGCGATGCTCGCCGCCATCGCCCGCTACTTCCCCGCCCAGACCCGGGTCAGCCAGCCGGCGGGGGGC TACTTCCTGTGGCTGGAGCTGCCGGAGCAGATGGATTCGCTCAAGCTGTTCCAGATGGCCCTGGCCCAGGGCATCAGCATCGCGCCGGGACCGATCTTTT CACCAACCCGGCGTTTCAGGAATTGCATCCGCTTGAATTACGGCAGCCCGTGGACCGAGGCCTCGGAAAAGGCCATGGAGACGTTGGGGCGGATTATTCG CTCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATCGGGTTGTCCGTCAGACCGCCATCGCGAGCAAGCTTTGCTCCCACATCGGAACACTGTCCCCTGTGGGAGCAAAGCTTGCTCGCGATAGGGCCAAAA CAGACACCCCAGGACTCAGCGCCCGCCCCCCAGATCCACAAACGTCCCAGTCGCATACGAAGCCTTGTCCGACAACAGCCAGATAATCGCTTCGGCCACT TCATCCGGACGCCCGCCCCGAGCCATGGGGATCGCTGATTCCAGCTTGCTGACCCGGTCCGGGTCACCGCTCAGGGCATGGAAATCGGTGTAGATGTAGC CGGGACGCACCGCGTTGACGCGAATGCCTTCGCCGGCCACTTCCTTGGACAAGCCGATGGTGAAGGTGTCCAGCGCGCCCTTGGAGGCCGCGTAATCGAC GTACTCCCCCGGTGCGCCCAAGCGCGCGGCCACCGACGAGACGTTGACGATGCTGCCACCCTGCCCGCCGTGCCTGGGCGACATGCGCAGCACCGCGTGC
Amino Acid Sequence
>GntR family transcriptional regulator
MKRYEKFADDIAELIRSGMLGPGQRVPSVRYASQTYGVSPSTVFQAYYLLERRGMIRARPRSGYFVNTHAPSPFSEPAISSQVHESTEVDVSELVFSVLD SIKDPATVPFGSAFPSPMLFPLQRLSRSLSSATRDMDPRMVVTDMSPGNPQLRRQIALRYMVGGLMLPMEELLVTNGALEALNLCLQAVTEPGDLVAIEA PAFYASLQVLERLKLKAVEIPVHPRDGIDLDVLAQTLERHPIKACWCMTSFQNPMGATMPEERKQALVELLRRHQVPLIEDDVYAELYYGQQAPKPAKAF DTEGLVMHCGSFAKSLAPGYRIGWVAAGRYAQKIERLKLMTSLCASMPAQAAIADYLQHGGYDRHLRKLRYALEEQQSAMLAAIARYFPAQTRVSQPAGG YFLWLELPEQMDSLKLFQMALAQGISIAPGPIFSPTRRFRNCIRLNYGSPWTEASEKAMETLGRIIRSF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site