Pseudomonas brassicacearum 51MFCVI2.1, PSBVI21_RS0119495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum 51MFCVI2.1 PsbVI21DRAFT_scaffold_1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGGCTGAACAGCCCTTCCCAAAACCGCTGCGACGGCTTTACATTGGTAGTCGCAGCGCGCCGAGGGGTTTGGTTAAAAAATCAGCGCTTCCCTAAACG CTGGTGTTTTTTTAAACTGTCGAGTCCGCTCGCCCAACCGGGCAGCGCGCATATTGCATTCGCTCCGAGGAATACCATGGCCCGCGTAACCGTTGAAGAC TGCCTAGAACACGTGGAAAACCGCTTTGAGCTGGTCATGCTCTCTACCAAGCGTGCCCGTCAACTGGCCACCGGTGGCAAAGAGCCGTTGGTCCAGTGGG AAAACGACAAGCCTACCGTAGTAGCGCTGCGTGAAATCGCCGAAGGCCTGATGAGCTACGAGTTCATCGCCAACGCTGAAATCGTCGAAGACGAACCGCT GTTCGCAGCGTTCGAGGACGAGTCCAACGAGGCGGTCTAAGCCTATGCCTGGTCGACGTAGCACGGCGCGGGGTCACAGCAAACGGCAGGAGTCATCATC
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| DNA Sequence for Gene |
>PSBVI21_RS0119495
ATGCCGAGCATAGACGCCCTCGCCGATCGCTTATCGGCCTACCTCGGCACGGACCAGGTCAATCTGGTCCGCCGAGCCTATTTCTACGCCGAACAAGCCC ACGACGGCCAGCGCCGCCGCAGCGGCGAGGCGTACGTCACGCATCCTCTTGCGGTGGCGAATATTCTTGCCGACATGCACATGGACCATCAGAGCCTGAT GGCGGCGATGCTGCATGACGTGATCGAAGACACCGGCATTGCCAAGGAAGCGCTGCAGGCGCAGTTCGGCGAAACCGTGGCCGAACTGGTCGACGGGGTC AGCAAGCTGACCCAGATGAACTTCGAGACCAAGGCCGAGGCCCAGGCCGAAAACTTCCAGAAAATGGCCATGGCCATGGCCCGCGACATTCGCGTGATCC TGGTCAAGCTCGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTCCGGCGAAAAACGCCGGCGCATCGCCAAGGAAACCCTGGAAATCTACGC CCCCATCGCCAATCGCCTGGGCATGCACGCGATCCGCATCGAGTTCGAAGACCTCGGCTTCAAGGCCATGCACCCGATGCGTTCGGCGCGGATAAACCAG GCCGTCAAGCGCGCCCGGGGCAACCGCAAGGAAATCGTCAACAAGATCGAAGAGTCGCTGAGCCACTGCCTGGCCATCGACGGCATCGAAGGCGAAGTCA GCGGGCGGCAGAAACACCTCTACGGCATCTACAAGAAAATGCGCGGCAAGCGTCGGGCCTTCAACGAGATCATGGACGTCTACGCGTTCCGGATCATCGT CGACAAGGTCGATACCTGCTACCGCGTGCTGGGCGCTGTACATAATTTGTACAAACCGTTGCCGGGGCGCTTCAAGGATTACATCGCGATCCCCAAGGCC AACGGCTATCAGTCGCTGCACACCACGCTGTTCGGCATGCACGGCGTACCCATCGAAATCCAGATCCGCACCCGCGAAATGGAAGAAATGGCCAACAACG GCATCGCCGCCCATTGGCTGTACAAATCCAGCGGTGACGAACAACCCAAGAGCACTCACGCCCGCGCCCGGCAATGGGTCAAGGGTGTGCTGGAAATGCA GCAGCGCGCCGGCAACTCCCTGGAATTCATCGAAAGCGTGAAGATCGACCTGTTCCCGGACGAGGTCTACGTTTTCACGCCCAAGGGCCGGATCATGGAG CTGCCCAAAGGCTCCACGGCCGTGGACTTTGCCTATGCGGTGCACACCGACGTCGGCAACAGTTGCATCGCGTGCCGGATCAACCGCCGCCTGGCGCCGT TGTCCGAACCGCTGCAAAGCGGTTCCACGGTGGAAATCGTCAGCGCCCCCGGCGCACGACCCAACCCGGCGTGGCTCAATTTCGTGGTCACCGGCAAGGC CCGCACCCATATCCGTCACGCCCTCAAACTGCAACGTCGCTCCGAATCCATCAGCCTCGGCGAACGTCTGCTGAATAAGGTGCTGAACGGTTTCGACAGC TCGCTGGACAAGATCCCGGTCGAGCGCGTGCAACTGATGCTCCACGAATACCGTCTCGAATTGATCGAAGACCTGCTCGAAGACATCGGCCTGGGCAATC GCATGGCCTACGTCGTTGCCCGTCGCCTGCTCGGCGAAGGCGAACAGTTGCCAAGCCCCGAAGGCCCGCTGGCGATTCGCGGCACCGAGGGCCTGGTGCT CAGTTATGCCAAGTGTTGTACGCCGATTCCGGGCGACCCGATTGTCGGCCACTTGTCCGCCGGCAAAGGGATGGTCGTGCACCTGGACAACTGCCGCAAC ATCAGCGAAATCCGTCATAACCCGGAAAAATGCATCCAGCTCTCCTGGGCCAAGGATGTCACCGGCGAATTCAACGTCGAGCTGCGGGTCGAGCTGGAAC ACCAGCGCGGCCTGATCGCCCTGCTGGCCAGCAGCGTCAATGCCGCCGACGGCAATATCGAAAAAATCAGCATGGACGAACGCGATGGCCGCATCAGCGT CGTTCAATTGGTGGTCAGCGTGCACGACCGTGTGCACCTGGCCCGCGTGATCAAGAAACTGCGCGCCCTGACCGGCGTTATCCGCATCACCCGGATGCGC GCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCATTCGTTATCAGGAGTCATTCATGACCAAGACCGTTATCACCAGCGACAAGGCCCCCGCCGCCATCGGTACTTATTCCCAGGCGATCAAGGCCGGCA ACACCGTGTACATGTCGGGCCAGATTCCACTGGACCCGAAAACCATGGAACTGGTGGAAGGCTTCGAAGCCCAGACCGTGCAGGTGTTCGAAAACCTCAA GGCCGTGGCCGAGGCCGCCGGTGGTTCGTTCAAGGACATCGTCAAGCTGAACATCTTCCTCACCGACCTGAGCCACTTCGCCAAGGTCAACGAGATCATG GGCAAGTATTTCGACCAGCCTTACCCTGCCCGCGCCGCCATCGGCGTGGCCGCCCTGCCAAAGGGCGCTCAGGTTGAGATGGATGCCATCCTGGTCATCG AGTAAATAAGGCCGGCGCAGCCTCCCCCGCTGCGCCGTTTTCGTCTTGAAAGGATTCCACCATGCGCAAAGCGCTTGCTCTCTCGCTGGCAGCCCTGCTT
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| Amino Acid Sequence |
>bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MPSIDALADRLSAYLGTDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDGV SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQ AVKRARGNRKEIVNKIEESLSHCLAIDGIEGEVSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPKSTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME LPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDS SLDKIPVERVQLMLHEYRLELIEDLLEDIGLGNRMAYVVARRLLGEGEQLPSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRN ISEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRMR A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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