Pseudomonas brassicacearum 51MFCVI2.1, PSBVI21_RS0109100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum 51MFCVI2.1 PsbVI21DRAFT_scaffold_15.16_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACTCGCCCTTGCTGGTCAGGCTGAACCCGCCCCGGCCGCGATGACACAACACCAGGCCCAGGGCCGACTCAAGCTGGCTCATGTAGGTGCTGATGGCCGA CGTGGACAGGTTGAGCTCGTGTTGAGCGTTGGCGAAACCCTGGTGCCGGACCACGCTGACGAAAATGCGCAGCAGTTTCAGGTCGGGTAGAGCGTTGGCC ATTGGGGGTGTCTCCATACAGACGGGTCACTGCAAACTTTGTGGCGAGGGGATTTATCTGTGGGAGCAAAGCTTGCTCGCGATACAGGCGCCTCGGTTCT AGAGGAAACCGCATGAACTTCATCGCGGGCAAGCCTTGCTCCCACAGTGTTGCTTCAACAGATCAATCGCGAGTCTATCGCCCCACCCCGCATTAGTTTA GAAAAATCTGAACTAAGTATTTGCCCCCAGCGATTCTTCCCATCCCAGGCTTTTCGCAGAATCGGCCCCTGATAAATAAAACAACGATGAGGCCCTACCC
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| DNA Sequence for Gene |
>PSBVI21_RS0109100
GTGGACAAGATTCTTCACCAACCACTGGGCGGCAACGAAATGCCGCGCTTCGGCGGCATCGCCACCATGATGCGACTCCCCCATTTGCAAACCGCTGCCG GCCTGGACGCTGCGTTCGTTGGCGTGCCGCTGGACATCGGCACCTCCCTGCGCGCCGGCACCCGTTTCGGGCCGCGGGAGATCCGCGCCGAATCCGTGAT GATCCGCCCCTACAACATGGCCACTGGCGCCGCGCCGTTCGACTCGCTGTCGGTGGCCGACATCGGCGACGTGCCGATCAACACCTTCAACCTGCTGGAC GCGGTGCGGATCATCGAGGAGTCGTACCACAAGATCCTCGAACACAACGTCATCCCCCTGACCCTGGGTGGCGACCACACCATCACCCTGCCAATCCTGC GGGCCATCCACAAGAAACACGGCAAGGTCGGCCTGGTGCACATCGACGCCCACGCCGATGTGAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCAC CACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGATTGCGACCGCGTGGTGCAGATCGGCCTGCGGGCCCAGGGTTACACCGCCGATGATTTCAACTGG AGCCGCAACCAGGGTTTCCGCGTGGTCCAGGCCGAAGAGTGCTGGCACAAATCCCTCGCCCCGCTGATGGCCGAAGTGCGTGAAAAAGTCGGCGGCGGCC CGGTGTACCTGAGCTTTGATATCGACGGCATCGACCCGGCCTGGGCCCCTGGCACCGGCACCCCGGAAATCGGCGGCCTGACCACCATCCAGGCGATCGA AATCGTCCGTGGCTGCCAGGGCCTCGACCTGGTCGGTTGCGATCTGGTAGAAGTCTCGCCGCCGTACGACACCACCGGCAACACCTCGCTGCTGGGCGCC AACCTGCTGTACGAGATGCTCTGCGTACTGCCTGGCGTGGTTCATCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGCGCCCATGAACGAACAGGACCAGGTGCTCCAGGCCGCCGCAAATTTGGTGTCGGCCTTCGCCCGCAATGACCGCGACGCCTACTTCGGCGCGTTCA CCACCGATGCGAGTTTCGTGTTCTACACCCTCGAACAGCCCCTGCTATCGCGCGATGCCTACCAGGCGTTGTGGGATCGCTGGCGGTCCGAGGATGGCTT CGAGGTGCTCAATTGCACCTCGAGCAACGCCTTTGTCAGCCTGCAAGGGGACGTGGCGATTTTCATCCATGACGTGGCCACCGAGTTGCGCATGCAAGGG GAGCTTCACTTTAGCCAAGAGCGCGAAACCATTGTGTTTCGCCAAGAACAACAAGGCCTATGGCTGGCCTGCCACGAACATTTGTCCGCAATGCCGGAAG GGCTGCCAATCCCTTAGCAACAGGTGACGCCCGCACACGACGGGCGCGCCTTTATGATCGGAGCAGATCATGCATAACAATAACGACAACAGCCTTACGC
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| Amino Acid Sequence |
>agmatinase
MDKILHQPLGGNEMPRFGGIATMMRLPHLQTAAGLDAAFVGVPLDIGTSLRAGTRFGPREIRAESVMIRPYNMATGAAPFDSLSVADIGDVPINTFNLLD AVRIIEESYHKILEHNVIPLTLGGDHTITLPILRAIHKKHGKVGLVHIDAHADVNDHMFGEKIAHGTTFRRAVEEGLLDCDRVVQIGLRAQGYTADDFNW SRNQGFRVVQAEECWHKSLAPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAIEIVRGCQGLDLVGCDLVEVSPPYDTTGNTSLLGA NLLYEMLCVLPGVVHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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