Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00021.21_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCTGGCCGGCAGCAATCAGGCTGCCTTGCTGGGTCAGGCGGCTTTGCGCCTGTGCGTATTCGGCTTCGCGGGTGGCGAGGGCGGCGTGGGCGCGCTCA ACCGCCAGCTCGAAGTCGGCGGCTTCCAGGCGCACCAGCAGGTCGCCTTTGTTGACGTGCTGGTTGTCCTCGACCGGCACCGTGTCGATGCGGGCGCCCA GCTGGCTGGAAATGCGCGTGATTTCGCCCTGCACATAGGCGTTGTCGGTGCTCTCGTAGAAGCGGCCTTTGAAGTACCAGTGGGCCAGGAAGGCGAGGGC GATGAGGGCCACGAGGGTGAAAAAGACCAGCAGGCGGCGTTTGAGTTGGGCGGGCATGGGGACTATCGTTCCAGAAATGTAAATAAATTTAACAGCGGCA CAGGGCCTGTCGACAAGTGACGTTCGCGCCATTGCTGGAGCCCGGTGCCTGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACCTTCC
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DNA Sequence for Gene |
>F629_RS0122570
ATGACCACCGTACGCACGCGTATCGCGCCATCGCCTACCGGCGACCCCCATGTCGGCACTGCCTACATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGC ACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGACCAGCTGCGTTCCACGCGCGAGTCGGAACAGCAGATCTTCGACGCCCTGCGCTGGCTCGGCAT CGAATGGAACGAAGGCCCGGACGTCGGCGGTCCGCACGGTCCGTATCGGCAGAGCGAGCGTGGCGAGATCTACGCCAAGTACGCCAAGGAACTGGTCGAC GCCGGCCACGCCTTCTACTGCTTCTGCACCGCTGAAGAGCTGGATCAGATGCGTGCCGAGCAGCAAGCCCGCGGCGAAACCCCGCGCTACGACGGTCGCG CATTGCTGCTGAGCGCCGAGGAAGTGCAGCGCCGCCTCGCCGCTGGCGAGCCACACGTGATCCGCATGAAGGTGCCGAGCGAAGGCATGTGCGTGGTCCC GGACATGCTGCGCGGCGATGTCGAAATCCCGTGGGACCGCATGGACATGCAGGTGCTGATGAAGAACGACGGCCTGCCGACGTACTTCCTGGCCAACGTG GTCGACGACCACCTGATGGGCATTACCCACGTACTGCGTGGCGAAGAGTGGCTGCCGTCGGCGCCCAAGCTGATCAAGCTGTATGAGTACTTCGGCTGGG AACAGCCAAAGCTGTGCTACATGCCGCTGCTGCGTAACCCGGACAAATCCAAGCTATCCAAGCGCAAGAACCCGACCTCGGTCACCTTCTACGAGCGCAT GGGCTTCATGCCCGAGGCGATGCTCAACTACCTGGGCCGCATGGGCTGGTCGATGCCGGACGAGCGCGAGAAGTTCTCGCTGGCCGAAATGGTCGAGCAC TTCGACCTGTCGCGCATTTCGCTGGGCGGGCCGATTTTCGACATCGAGAAGCTGTCGTGGCTCAACGGCCAGTGGCTGCGCGAGCTGCCGGTCGAGGAAT TCGCGGCACGCCTGCAGAAGTGGGCATTCAACAGCGACTACATGATGAAGATCGCCCCGCATGTGCAGGGCCGTGTGGAAACCTTCAGCCAGGTTGCCCC GCTGGGCGGGTTCTTCTTCGAAGGCGCGCTGAAGCTGGATGCCAAGCTGTTCGAAAGCAAGAAACTGTCGGCCGACCAGGTGCGTCAGGTGATCCAGCTG ATCCTGTGGAAGCTCGAAAGCCTGCGCCAGTGGGAAAAAGAGCGCATCACCGGCTGCATCCAGGCCGTGGTCGAGGCGCTGGAACTGAAGCTGCGTGACG CCATGCCGCTGATGTTCGCCGCCATCACTGGCCAGGCCAGTTCGGTTTCGGTACTGGACGCCATGGAAATCCTTGGCCCGGACCTTACCCGCTACCGCCT GCGTCAGGCTCTGGACCTGCTGGGTGGCGTGTCGAAGAAAGAAAACAAGGAGTGGGAAAAGCTGTTGGCCTCGATCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGCGTTTCCCAGCCTGTAGCTGAAACCTGTGGGAGCGGGTTCGCCCGCGAATACGATGGCGCTTGCACTGCCGCATTCGCGGGTAAACCTGCTCCCACA GGGTTCGATGCTGGGGTTTTGGTAGGGCAGGGCGGTAAGTGATTGTTATCTGTGAAAATTTTTTTGATTATTTTAAAAAATTAGTTTGACAGCCCTGCAA TCCGAACTTAATATGCGCCCCGTCCACAGCGATGAACGAAAACGAAACGCCAGCCACCCAGCCAGCGATTCTGTTCAGAGCGACATTGTGGGGCTATAGC TCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAAATTCCGCTTACCAGCCAAGGCTGATAAGCAAGAC CGGGTCCAGCAACCGGGTCTTGAAGGTAAGAAGGTTCGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCC
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Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIEWNEGPDVGGPHGPYRQSERGEIYAKYAKELVD AGHAFYCFCTAEELDQMRAEQQARGETPRYDGRALLLSAEEVQRRLAAGEPHVIRMKVPSEGMCVVPDMLRGDVEIPWDRMDMQVLMKNDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLIKLYEYFGWEQPKLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLAEMVEH FDLSRISLGGPIFDIEKLSWLNGQWLRELPVEEFAARLQKWAFNSDYMMKIAPHVQGRVETFSQVAPLGGFFFEGALKLDAKLFESKKLSADQVRQVIQL ILWKLESLRQWEKERITGCIQAVVEALELKLRDAMPLMFAAITGQASSVSVLDAMEILGPDLTRYRLRQALDLLGGVSKKENKEWEKLLASIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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