Pseudomonas sp. LAIL14HWK12:I5, F629_RS0118100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00013.13_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGAAGCCCATGCGGTTGATGATGGCCGTCGCTTCCGGCAGGCGGAACAACCGCGGCTTGGGATTGCCCGGTTGCGGGCGCGGAGTGACGGTACCGATTT CGACGAAGCCGAAGCCCAGCTGGGCAAAGCCGTCGATGGCCGCGCCATTCTTGTCCAGGCCTGCGGCCAGGCCCACCGGGTTAGCGAAGTTCAAGCCCAT GACCGAAACCGGCAATGCCGCCGGCTGCTTGCACAGCATGCCATTGAGGCCAAGACGGCCACCGGCACCGATCAGGTCCAGGGACAGGTCGTGGGAAGTT TCCGGGGAAAGCTTGAACAGCAGCTGGCGGGCCAGGGTATACATGGGCGGGCAAGGCTCGGGGTGAGTGAGGGGGCGATTATAGCCAGCCTGGGGCTGAC AGGACAGCAAATCGTGGGGCCGCCAAGCACCCCGGCTACCCTTGGCACATCGGTTGCACCGGTTTGGCCCACAGCCTTATCCGTACAGGCGAGGAACCTT
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| DNA Sequence for Gene |
>F629_RS0118100
GTGAACACCGTACCCCGAGCAACGCCCCTGGCCTGGGTCAATGGCAGTGACGCGCCGGAAAAGCCCAGCCTGAACATCGGCTATATGGCACTGACCGACT GCGCCTCGGTGGTGGTCGCCGCCACCCAGGGCTTCGCCCAGCAATACGGCCTTACCCTCAACCTCAAGCGCCAAGGCTCCTGGGCCGGGCTGCGCGACAA GCTGGTCAGCGGCGAGCTGGATGCCGCGCACTGCCTGTATGGCCTGGTCTATGCCGTGCACCTGGGCATCGGTGGCGTACCGGCCAGTGACATGGCGGTG CTCATGGGCCTGAACCAGAACGCCCAGGCCATCAACCTCTCCCCTGCCTTGCAGCGCAAAGGCGTGACCAACCCTGAAGCATTGGCGCGCCTGGTGCACC AGCATGGCGCACGCCTGACCTTCGCCCAGACCTTCCCCACTGGCACCCACGCCATGTGGCTGTATTACTGGCTGGCCAGCCAAGGCATCCACCCGCTGCG CGACGTGGACAGCGTCGTGGTGCCGCCGGCCCAGATGGCCGCGCATATCCAGGCGGGGCGCATCGACGGCTTCTGCGTGGGTGAGCCTTGGGCCGCCGAT GCTGTGGCCAAGGGCCAGGGCTTTACCCTGGCCACCAGCCAGTCGATATGGCCAGACCATCCGGAAAAGGTGCTGGCGTGTGCTCGCACCTTCGCCGAAC ACTACCCCAACAGCGCCCGCGCACTCATCAAGGCGATCCTAGCCGCCAGCCGGTTCATCGAGCAAAGCCCCGAAAACCGCCGCAGCACTGCGCAACTGCT TAGCGGCAACGCCTACCTGGACACCCCGCTGGACAGCATCGAGCCCCGCCTGCTCGGCCACTATCAGGATGGCCTGGGCAACCAGTGGCAAGACCCGCAC GCCCTGCGCCTGTTCGACCAGGGCCGAGCCAACCTGCCGTACCTGTCCGACGGCATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGTTGCGCGAAG ACCCCGACTACCTCGGTGTGGCTCGGCAGGTTCAGCAGTTGGCGCTGTACAGCGAGGCGGCGCAAAGCCTGGGCGTCGCGTGCCCCGAACAGCCGATGCG CAACAGCCTGCTGATCGATGGCATCCGCTGGGACGGCAGCGATCCTTATGGCTATGCCCGCAGCTTCAGCCTGCATGCCCTGGGCGACCTGCCCGATGCC CGCGTCGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGGACCAACATGTTGCGCATTCTGCTGATCGACGACACCCAGAACAAACTCGGCCGCCTCAAGGCGGCGTTGATCGAGGCCGGCTTCGAGGTTACCGA AGCCCCAGGCCTGACCATCGACCTGCCCGCCTGCGTCGAAACGGTGCGCCCGGATGTGGTACTGATCGATACCGACTCACCGGACCGCGACGTGATGGAA CAGGTGGTGCTGGTCAGCCGCGACCAGCCGCGCCCCATCGTGCTGTTCACCGACGAGCACGACCCTGGCGTGATGCGCCAGGCGATCCAGGCAGGCGTCA GTGCCTACATCGTCGAAGGCATCCATGCTGCCCGGCTGCAGCCGATTCTGGATGTGGCCATGGCCCGCTTTGAAAGTGACCAGGCGCTTAGGGCGCAGCT GCTGGCGCGCGACCAGCAGTTGGCCGAGCGCAAGCGTATCGAGCAGGCCAAGGGTTTGCTGATGAAAATGAAGGATTGCAACGAAGAACAGGCCTACACC
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| Amino Acid Sequence |
>nitrate transporter
MNTVPRATPLAWVNGSDAPEKPSLNIGYMALTDCASVVVAATQGFAQQYGLTLNLKRQGSWAGLRDKLVSGELDAAHCLYGLVYAVHLGIGGVPASDMAV LMGLNQNAQAINLSPALQRKGVTNPEALARLVHQHGARLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAHIQAGRIDGFCVGEPWAAD AVAKGQGFTLATSQSIWPDHPEKVLACARTFAEHYPNSARALIKAILAASRFIEQSPENRRSTAQLLSGNAYLDTPLDSIEPRLLGHYQDGLGNQWQDPH ALRLFDQGRANLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLALYSEAAQSLGVACPEQPMRNSLLIDGIRWDGSDPYGYARSFSLHALGDLPDA RVGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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