Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAACATGATGGGCAAGCGCGAAGACAAGAACCTCGAACAGCAGACCACCATGGCCCTGATCCGTGAGCTCAAGCTGGGCGCGAGCAAGGGCACCAAGGT GATCCTGGTGGGCAAGGACGGCGAGCGGCACATGCTCAAGGATGACGAAAGCGGTGAACCTATCGACCCGCAGGCGATTTTCAAGGCGGTCGATGAATTG CCCGCCAGCGAAAAGGCGGTGACCGCACCCGAACCGGTGGCCGCAGCGCCGGAGGCCAAGGCCAAGGACAGCAAACCGGCCAAGCCAGCCAAACCGGCGG CCCCGCCCAAGCCGCTGGAAGACTGAACACGCGTCATGGCCCCAAGGTAGCTTGGGGCCCGTTACCGGGTGTTGTGTATCCCACTGTATCTGACCGCGCT GCAGACCCATTCCCATACAAAAGCGCGCCTTGCCCGATACACTCACGACAAACCGCAACGGCCTAATGGCTCCACTTTCCAACCACAGTGGAGCTACATC
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DNA Sequence for Gene |
>F629_RS0116670
ATGACTCATGCAAAAAACACCCTCGGCCTGCTCGGCGCCGCCCTGATCGGCAGTATGGCATTGACCAGCAGTGCGTTTGCCGTGGAACCGCTGGCACAAG GTTACCAACTGGCTTCGGCCAAGGTGGCCGGCGAGGGCAAATGTGGCGAAGGCAAGTGCGGCGGCAGCGGCAAAGCCACCCAGGGCGAAGGCAAATGCGG TGAGGGCAAGTGTGGTGCCAGCGCCAAGGCCGGGGCCGAAGGCAAATGCGGCGAAGGGAAGTGCGGCGATGCCTCGTTCGCCAAAACCGACAGCAACCAC GATGGCAAGGTCTCGCGGGATGAGTTTCTGGCGGTGGCCAAGGACCGTGCCGGCGACTTCGACAAGATCGACACCAACCATGACGGTTTCATCTCCGAGC AAGAAGCGGCGGACCACCTGAAGGCGATCTATCAGGCCAATGGCAAGGCCATGCCCGAGGGGCTGTTCAGCCACCTGGCTGGCAAATCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCTTACCCTTTGAACTGACGCAACGCCCCTCCTGCTGGTCAGGCGGGGCGTTGTGCCTGTTGGAGACTTTTTTATGCGTGCTGCGACGTTGAATACCGG GCTTGGCTTGCGCCGTGGCCTGCTGCCGGAACTGCTGGCGATGGACGCTGGTGCAGTAGACTTCCTTGAATGCGCGCCGGAAAACTGGATAGCGGTTGGC GGTGCCTACGGCAAGGGCCTGGCCCAGTTGGCCGAGCGTTTTCCCATGACTTGCCACGGGTTGTCGTTGTCGCTGGGCGGCAGTGAGCCACTCGACCTTC ATTTTCTCGACCAGACCCGCCATTTTCTCGATCGCCACCAGGTGCGCCTGTACAGTGAGCACTTGAGCTATTGCAGTGACGACGGGCACCTGTACGACCT GATGCCCATACCGTTCACCGACGAAGCCGTGCACCATGTGGCCGCGCGCATTCGCCAGGCGCAGGAGCAATTGGGCCGGCGTATTGCCGTGGAAAACATC
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Amino Acid Sequence |
>hypothetical protein
MTHAKNTLGLLGAALIGSMALTSSAFAVEPLAQGYQLASAKVAGEGKCGEGKCGGSGKATQGEGKCGEGKCGASAKAGAEGKCGEGKCGDASFAKTDSNH DGKVSRDEFLAVAKDRAGDFDKIDTNHDGFISEQEAADHLKAIYQANGKAMPEGLFSHLAGKS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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