Pseudomonas sp. LAIL14HWK12:I5, F629_RS0116190
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCATGGCTGGGTCATGCCCGGCCAGCGGGCTTAGCATCAGGTTGCGCACATCATCACCGGCCGCTTCGCGCGGGCCCAGGCCGGCAACGAGCAACGTGTC GATCAGCGCACGGTGCTCGCTGCCGATGCCACGAATTTGCAGGTTGCCACGGTTGGTGGCCTCGATCACACCGCCGGCGAAGCGCTCGGCCGCCGCCGCC ACCGCTTCGGCCTGGCTGACCAGCAGCAGGCCGCCCGGCAGCTTGATGCGGCAGATGCCGCCGTCACGGGCACTGACGATGCGCCACAACCCCGGGCAGG CCGAGGGGCGGGGCGAAACGTTGGGAGCATGGGCCTGCGTCAAAGGGGCGTCCGGCAATCTGTGAAAATGCGCTTGAGTGTAGAAGGCGCGGTATTATGC CTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCATTCGAGTTTGAGCAGATTTTTGGGTGCGCAGCGGCCCCAAAATCTTGAAGAGGTATAC
|
|
| DNA Sequence for Gene |
>F629_RS0116190
ATGGCACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGTGGCCTGGGCAAACAGGCCCGGCGCGCGCTGCTGGGTGCTGCGCGGATCTTCG GCAGCCCGCGCCAGCTGGCCTTGCTGCCACGCTGCGTGCCCGGCGAACGGCTGGGCTGGCCAAGCCCGTTCTCGCTGGCCCCGGTGCTGGCCTTGCGCGG CGAGCCGGTGTGCGTGCTGGCCAGCGGCGACCCGATGTTCTACGGCGTCGGCGCCAGCCTGGCGCGCCAGGTGCCTGCCGATGAAATGCGCGTGCTGTCG ATGCCCTCTTCCTGCGCCATGGCTGCTGCGCGCCTGGGCTGGCCGCTGCAGGACGTGCAAGTGGTGTCGCTGGTCGCCCGCCCCTTGGCGGCGCTCAATG CCCACCTGCACAGCGGTGTGCGCTTGCTGGTGCTGAGCAACGATGGCAACAGCCCGGCGGCCGTTGCAGCATTGCTTCGCGAACGTGGCTTCGGGCCAAG CCGCCTGCAGGTTTTCGAACACCTGGGTGGCCAGGAAGAGCGCGCATTGGAGGGCACCGCCCAAAACTGGCCGCACGCCGAAACCGCAGCGCTCAACCTG GTGGCCATCGAATGCCTGGCCTCACCCGAAGCGCCACGCCTGCATCGCCTGGCCGGGCTGCCGGACAGTGCCTTCCGGCACGACGGCCAGCTGACCAAGC GCGATGTCCGCGCTATCACACTGGCGCGCCTGGCGCCCCAGCCCGGCGAACTGCTGTGGGACGTGGGCGCCGGCTGCGGCTCGATCGGCATCGAATGGAT GCGTGCCCACCCGGCCTGCCGCGCACTGGCCATCGAGGCCGACGAAGGCCGCCAGGGCTTCATCGAACATAACCGCGATGCGCTGGGCGTACCTGGCCTG CAACTGGTTCGCGGCAAGGCGCCAATGGCACTGCAAGGCCTGGAACAGCCCGATGCCATCTTCATCGGCGGCGGCGTCACCCGTGAAGGCGTGCTGGACT TTTGCTGGGCGAACCTGCGCCCCGGCGGCCGGCTGGTGGCCAACGCAGTGACCTTGCAAAGCGAACTGGCCCTGGCGCACTTTCGCGAACAGCACGGGGG TGAACTGACCCGCCTGCATGTCGCCCATGCCCAACCCTTGGGCACGTTCGATACCTGGCGCCAGGCGCTGCCGATCACCCTGCTGGAAGTGATGAAGCCC GCCGATGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGAAACCCGCGAACAGCCGGCGCCCCTGCGCAGCGGCCTGACCACCGGCAGCTGCGCTACCGCCACCAGCCTGGCAGCGGCCAAGCTGCTGCTCACCGGC CAGCAAGACGATGCAGTGGATTTCACCCTGCCCAAGGGCAAGGTGGTGCAGATGCGCCTGGAGTTCTGCCGCCTGATCGGCGAAGGCGCCGAAGCCGGCA CCCTCAAGGATGCGGGCGACGACCCGGACGTGACACACGGCGCCTTGCTCTACAGCCAGGTGCGTCTGTTGGCCGAGACGGGCATCCGCTTTGTCGCGGG GACCGGCGTCGGCACCGTGACCCGGCCGGGGCTGGTGCTTGCGGTGGGCGAACCGGCCATCAACCCGGTACCTCGGCGCATGATCACTGAACACCTGCAG CGCCTGGCCGATGAGTGTGGCTATCCCGGCGGTTTCGAGGTCACGGTCAATGTGCAGGGCGGTGAGCAACTGGCCCTGAAGACCATGAACCCGCGCCTGG
|
|
| Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MAPWLTVVGIGEDGFSGLGKQARRALLGAARIFGSPRQLALLPRCVPGERLGWPSPFSLAPVLALRGEPVCVLASGDPMFYGVGASLARQVPADEMRVLS MPSSCAMAAARLGWPLQDVQVVSLVARPLAALNAHLHSGVRLLVLSNDGNSPAAVAALLRERGFGPSRLQVFEHLGGQEERALEGTAQNWPHAETAALNL VAIECLASPEAPRLHRLAGLPDSAFRHDGQLTKRDVRAITLARLAPQPGELLWDVGAGCGSIGIEWMRAHPACRALAIEADEGRQGFIEHNRDALGVPGL QLVRGKAPMALQGLEQPDAIFIGGGVTREGVLDFCWANLRPGGRLVANAVTLQSELALAHFREQHGGELTRLHVAHAQPLGTFDTWRQALPITLLEVMKP ADA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|