Pseudomonas sp. LAIL14HWK12:I5, F629_RS0115275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGTAGAAAAGCAAAAAGCCCAGACCATGTACGGTGTCGAGCCATACGTAGAAACCAAGGGTGAAGAGTACATGGGCGAGCCCATGAAAAAGCACTTCAC CAAGCTTCTCGGCGCCTGGAAGCAAGAGCTGATGACCAGTGTGGACCGTACTGTGGACCACATGAAGGACGAAGCAGCCAACTTCCCCGACCCGGCCGAC CGCGCCAGCCAGGAAGAAGAATTCGCCCTGGAGCTGCGCAACCGCGACCGCGAGCGCAAGCTGATCAAGAAAATCGACAAGACCCTCGACAAGATCAAGG CCGATGAATACGGCTGGTGTGAGTCGTGCGGTATCGAAATCGGCCTGCGCCGCCTGGAAGCCCGTCCGACCGCGGACCTGTGCTTCGACTGCAAGGAAAT CGCCGAGAAAAAGGAAAAAACGGTCGGCAAAGGCTGATCTTTCTTCCACCTGAACGGGGCGCTCGATGCGCCCCGTTTCATTTATATGCCCAGCCAGACC
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| DNA Sequence for Gene |
>F629_RS0115275
ATGACCGACTCCAGCTACATCGGGCGCTTTGCCCCTACCCCCAGCGGCTTCCTGCACTTCGGCTCGCTGGTCGCCGCCCTCGCCTCCTGGCTCGATGCCC GCGCCGTCAACGGCCGCTGGCTGCTGCGCATGGAAGACACCGACCCACCCCGCGAAATGCCCGGCGCCCGCGATGCCATCCTGCAAACCCTCGAACGTTA CGGCCTGGAATGGGATGACGAGGTTGTGTTCCAGAGCCAGCGCCACGACGCCTACGCGGCGGTGGTCGACCGCCTGTTCAACATGGGCCTGGCTTATGCC TGCACGTGTTCGCGCAAGCAACTGGAGGGTTACAACGGGATTTACCCGGGCCTGTGCCGCAACGCCGGGCATGCCCGTGAAGGCGCAGCAATCCGCTTGC GCGTGCCCGAGCTGATCTACCGCTTTACCGACCGGGTGCAGGGTGAGTACCAGCAACACCTGGGGCGTGAGGTGGGCGACTTTGTCATCCAGCGCCGTGA CGGGCTGTATGCTTACCAGCTGGCAGTGGTGCTGGACGATGCCTGGCAGGGTGTTACCGATATCGTGCGTGGCGCCGACCTGCTCGACAACACCCCGCGC CAGCTGTACCTGCAAGAGCTGCTGGGCTTTTCGCAGCCGCGCTACCTGCATATTCCACTGATCGTACAGCCGGACGGGCACAAGCTGGGCAAGTCGTACC GCTCGCCGCCGTTGCAGGCGGAGCATGCTACGCCGTTGTTGCTCCGGGCCTTGCGGGCGCTGGGGCAAGAAGCAGACCCCGAGTTACTGCTGGCAACACC GGCTGAAGTGCTGACGGTGGCGCGCAAGCAGTGGCGGCCAGAGGCGATTGCGCAGCGGACAACGGTGCCAGAGGCTGATTTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCCATACCTGACTGGCAATGCGCTCCTACAGGGATCGCAAAAAACTGAAAAAGGGGCATCACACCGAGCATCAAAAGCCCAACAAATTCAAACCCTTG GCGAACACCGTGGATTCCCGCTAGCATCCCCCCCGCCATTTGCGCCAATAATAAGTCCAAGCCCGCAGCGCCCAACCATCGAGGCCAGCATGTACATCTA TCGTTTGGTCCTGCTTCTGGTCGTGGGGATCTACCTGTTCTCCCCGGCCATCATGGACTGGTGGATCGAACCGACCGGTGCCTGGTACCGCCCTTACCTG CTCTGGCTGATCCTGATCGTCGTCACCTTCATCCTGCAGAGCCAACGAGATGCCGATGAGCTTTAGCCTGACCCAGATGATCCTGATCAGCGCCGGGTAC CTCATGGTGCTGTTTGGCGTGGCCTGGATCAGCGAGCGGGGGGTCATCCCGCGCTCGATCATTCGCCACCCGCTTACCTACACCCTGTCGCTGGGCGTGT
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTDSSYIGRFAPTPSGFLHFGSLVAALASWLDARAVNGRWLLRMEDTDPPREMPGARDAILQTLERYGLEWDDEVVFQSQRHDAYAAVVDRLFNMGLAYA CTCSRKQLEGYNGIYPGLCRNAGHAREGAAIRLRVPELIYRFTDRVQGEYQQHLGREVGDFVIQRRDGLYAYQLAVVLDDAWQGVTDIVRGADLLDNTPR QLYLQELLGFSQPRYLHIPLIVQPDGHKLGKSYRSPPLQAEHATPLLLRALRALGQEADPELLLATPAEVLTVARKQWRPEAIAQRTTVPEADLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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