Pseudomonas sp. LAIL14HWK12:I5, F629_RS0111745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCACCCGCTCGGGCAGCGCGATGTTCCACTACCAGCCTGAAGACAACCCGAACAAGGTGCTCAACCTCGGTTATCGCTACCGTAACGACACCATCTCC TACGATTCCACGACGGGTACCTGGAAAGTGGGCGGTGGCGACTACGGTGTTCCTGGTAGCGCGAACTACATCAAGGATTACTACAAGATCCAGCAGCACG ATTTCTCGGTCATCTGGCCGATCGTTCCGCAGTGGAACGTTATCGCTCGCTGGCAGCATGACTACAACCGCAACCGCACCCTGGAAGCCATGGGCGGTTT CGAGTACGACAACTGCTGCTGGAAGCTGCGCCTGATCAACCGCTACTGGATCGATTACGACGACTTCAGCCAAGCCCTCCCGGCGAACGAAAAAGGCGAC CACGGTGTCTTCCTTCAGATCGTCCTGAAAGGCCTCGGTGGCGTAGTTGGCAACAAGGTCGAATCTTTCCTCGACCAAGGCATTCAAGGTTACCGTGAAC
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| DNA Sequence for Gene |
>F629_RS0111745
GTGAAGACCAAGCTTATTGATCGACTGCGCCCGGCGTTGCTGGGCGTTGCATTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGG TGGCCATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCACGAGGTACAGCAAACCATCGCCAAGCGCGGCGGCGGTGTGCCGCC GACCGGTGCCCTGGAACAGCAAGTACTGGAGCGCCTGATCGTCGAAAACCTGCAACTGCAGATCGGCGAACGTTCCGGCATCCGCATCACCGACGAAGAG CTGAACCAGGCCATCGGCACCATTGCCCAGCGCAATGGCATGTCGCTGGACCAGTTCCGTGCTGCCCTGGCCCACGACGGCCTGTCGTTCGACGACGCCC GCGAGCAGGTCAAGCGCGAGATGATCATCAGCCGCGTGCGCCAGCGCCGTGTGGCCGAGCGCATCCAGGTGTCGGAGCAGGAAGTGAAGAACTTCCTCAA CTCCGACATGGGCAAGATGCAGATGTCGGAAGAGTACCGCCTGGCCAACATCCTGATCCCGACCCCGGAAGGCGCCAACTCGGAAGCCATCCAGGCGGCG GCGCGCCAGGTTGGCGATGTGTACCAGCAGCTCAAGCAAGGCGCCGACTTCGGCCAACTGGCCATTGCCCGCTCCGCCAGCGAAAACGCCCTGGAAGGCG GCGAAATGGGCTGGCGTAAAGCCGGCCAGCTGCCACCCGACTTCGCCAAGATGCTCAGCAGCATGCCGGTCGGCGAAATCACCCAGCCTATCCGCATCCC TAACGGCTTCATCATCCTCAAGCTCGAGGAGAAGCGCGGGGGCAGCGAGAACGTGCTGCGTGACGAAGTGCATGTACGCCACATCCTGATCAAGCCAAGC GAGATCCGCAGCGATGCGGCTACCGAGCAACTGGCCGAGCGCCTGTACGACCGCATCAAGAACGGCGAAGACTTCGGCGAACTGGCGAAGAGCTTCTCGG AAGACCCAGGCTCGGCGCTTAACGGCGGCGACCTCAACTGGGTAGACCCGAACAGCCTGGTACCGGAGTTCCGTGAACAGATGGCCAACGCCCAACAAGG CGTTGTAACCAAGCCGTTCAAGACCCAGTACGGCTGGCATGTGCTGGAAGTGCTGGGCCGCCGTGCCACCGACAGCACCGAGCAGGCTCGCGAACAGCAG GCCCTGAGCGTTCTGCGTAACCGCAAGTACGACGAAGAGCTGCAAACCTGGCTGCGCCAGATCCGCGACGAAGCCTACGTTGAAATCAAGCTGCCTGGCG CTGACCAGGCCGCCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCCCCTGCGCTTCGCCGTCACTCCCGGCGAACCAGCCGGTATAGGTCCCGACCTGTGCCTGCTGCTCGCCGCAGACGCCCAGCCCCACCCCCTGATCGC CATCACCAGCCGTGACCTGCTCGCCGAGCGGGCCACGCTGCTGGGGCTGGCTGTCAGCCTGCTGCCGGTAGCCCCGGGCCAATGGCCCGACCAGCCGGCA CCCGCAGGCAGCCTTTACGTCTGGGATACCCCCCTCGCTGCCCCGGTAGCGCCAGGCCAGCTCGACAAAGCCAACGCCGCGTTCGTGCTGGAGACCCTGA CCCGTGCAGGCCAAGGCTGCCTGGACGGGCACTTCGCCGGGATGATCACCGCCCCGGTGCACAAGGGTGTTATCAACGAAAGCGGTATCGCCTTCTCCGG GCATACCGAGTTCCTTGCCGAACTGACCCACACCGCACAGGTGGTGATGATGCTGGCCACCCGTGGCTTGCGTGTGGCCCTGGTGACCACACACCTGCCA
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| Amino Acid Sequence |
>molecular chaperone SurA
MKTKLIDRLRPALLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTGALEQQVLERLIVENLQLQIGERSGIRITDEE LNQAIGTIAQRNGMSLDQFRAALAHDGLSFDDAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLNSDMGKMQMSEEYRLANILIPTPEGANSEAIQAA ARQVGDVYQQLKQGADFGQLAIARSASENALEGGEMGWRKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPS EIRSDAATEQLAERLYDRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQ ALSVLRNRKYDEELQTWLRQIRDEAYVEIKLPGADQAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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