Pseudomonas sp. LAIL14HWK12:I5, F629_RS0110345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCGGCGACAACACCGCCTCGGTACAGCTGGTGCTGGAAGACGGCAGCCTGTTCAAGCAGGAAGGTCGTCTGGAGTTCTCCGAAGTCGCGGTTGACGA GACCACCGGCTCGGTCACCCTGCGCGCCATCTTCCCCAACCCCGACCACACCTTGCTGCCTGGCATGTTCGTGCATGCGCGGCTGAAGGCCGGTGTCAAC GCCAACGCCATCCTGGCGCCGCAACAGGGCGTGACCCGCGACCTCAAAGGCGCGCCGACCGCGCTGGTGGTCAACCAGGAGAACAAGGTCGAGCTGCGCC AGCTCAAGGCCAACCGTACCCTGGGCAGCGACTGGCTGATCGAGGAAGGCCTCAACCCGGGTGACCGCCTGATCACCGAAGGGCTGCAGTACGTGCGCCC GGGCGTCGAAGTGAAGGTCAGCGAAGCCACCAACGTCAAGAAGCCGGCCAGCCCTGATCAGGCCAACGCGGCGAAAGCAGACGCCAAAGCGGAGTAAACC
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| DNA Sequence for Gene |
>F629_RS0110345
ATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCGCCTTGGTGATCATGCTGGTCGGCGCCTTGTCGATCCTGAAGTTGCCGATCAACC AGTACCCCAGCATCGCGCCGCCGGCCATCGCCATCGCCGTGACCTACCCGGGCGCCTCGGCGCAAACCGTGCAGGACACCGTGGTACAGGTGATCGAGCA GCAGCTCAACGGTATCGACAACCTGCGTTATGTGTCGTCGGAAAGTAACTCCGACGGCAGCATGACCATTACCGCTACCTTCGAACAAGGCACCAACGCC GACACTGCGCAGGTGCAAGTCCAGAACAAGCTGAACCTGGCCACCCCGCTGCTGCCGCAAGAAGTGCAGCAGCAAGGTATCCGCGTTACCAAGGCCGTTA AAAACTTCCTGCTGGTGATCGGCCTGGTGTCCGAAGACGGCAGCATGACCAAGGACGACCTGGCCAACTACATCGTCTCCAACATGCAGGACCCGATCTC GCGTACTGCGGGCGTGGGTGACTTCCAGGTGTTCGGTGCCCAGTACGCCATGCGTATCTGGCTCGATCCGGCCAAGCTGAACAAGTTCCAGCTGACCCCG GTCGACGTCAAGACCGCCGTGGCCGCGCAGAACGTGCAGGTGTCTTCCGGTCAGCTCGGCGGCCTGCCAGCGTTGCCGGGTACCCAGCTGAACGCCACCA TCATCGGCAAGACCCGTCTGCAGACTGCCGAGCAGTTCGAAAAGATCCTGCTCAAGGTCAACAGCGATGGTTCGCAGGTGCGTCTGGGTGATGTCGCCCA GGTAGGCCTGGGCGGCGAAAACTACGCGGTCAGCGCCCAGTTCAACGGCAAGCCGGCTTCCGGCCTGGCGGTAAAACTGGCAACCGGCGCCAACGCCCTG GACACCGCCAAGGCGCTGCGCCAGACCATCGCCGACCTGGAACCGTTCTTCCCGCCGGGGGTGAAAGCCGTATTCCCGTATGACACCACCCCGGTGGTCA CCGAATCGATCAGCGGCGTGATCCACACCCTGATCGAAGCCGTGGTCCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAGAACTTCCGCGCCACCATCAT CACCACCATGACCGTTCCGGTGGTGTTGCTGGGTACCTTCGGCATCCTGGCCGCTGCGGGCTTCAGCATCAACACCCTGACCATGTTCGCCATGGTCCTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAGCGGGTAATGTCCGAGGAAGGCCTGCCGCCCAAGGAAGCGACCAAGCGCT CGATGGAGCAGATCCAGGGTGCCCTGGTGGGTATTGCCCTGGTGCTGTCGGCGGTACTGCTGCCCATGGCGTTCTTTGGTGGTTCCACGGGGGTGATCTA CCGGCAGTTCTCCATCACCATCGTCTCGGCCATGGGCCTGTCGGTGCTGGTGGCGCTTATCTTCACCCCGGCCCTGTGCGCCACCATGCTCAAGCCGCTG AAGAAGGGCGAGCACCATGTGGCCAAGCGTGGCTTCTTTGGCTGGTTCAACCGCAACTTCGACCGCAGCGTAACCGGCTACGAACGCAGCGTTGGTACCA TCCTGCGCAACAAGGTGCCGTTCCTGCTGGCCTATGCCCTGATCGTGGTTGGCATGATCTGGCTGTTCGCCCGTATTCCTACCGCCTTCCTGCCTGAGGA AGACCAAGGCGTATTGTTCGCCCAGGTACAGACCCCGGCCGGTTCCAGTGCCGAGCGTACCCAGGTGGTGGTCGACCAGATGCGTGAGTACCTGCTGAAG GAAGAAGCCGACACCGTATCCTCCGTGTTCACCGTCAACGGCTTCAACTTCGCCGGTCGCGGCCAGAGCTCGGGCATGGCGTTCATCATGCTCAAGCCTT GGGACGAGCGCTCCAAGGAGAACAGCGTGTTCGCCCTGGCCCAACGTGCCCAACAGCACTTCTTCACCTTCCGCGATGCAATGGTGTTCGCCTTCGCCCC GCCAGCAGTACTGGAGTTGGGTAACGCCACCGGCTTCGACGTGTTCCTGCAGGACCGCGGCGGTGTCGGCCACGAGAAGCTGATGGAAGCGCGCAACCAG TTCCTGGCCAAGGCTGCACAAAGCAAGATCCTCAGTGCCGTACGCCCTAACGGCCTGAACGACGAGCCGCAGTACCAACTGACCATCGATGACGAACGTG CCAGCGCCCTGGGCGTGACCATCGCCGACATCAACAACACCCTGTCGATTGCCTTGGGTGCCAGCTACGTCAACGATTTCATCGACCGTGGCCGGGTCAA GAAGGTCTACATCCAGGGCGAACCAAACGCCCGGATGAGCCCGGAAGACCTGCAGAAGTGGTACGTGCGCAATGGCGCTGGCGAGATGGTGCCGTTCTCC TCCTTCGCCAAGGGCGAGTGGACCTACGGTTCGCCGAAGCTGTCGCGCTACAACGGTGTCGAGGCGATGGAAATCCTGGGTGCGCCAGCGCCGGGCTACA GTACCGGTGAAGCCATGGCCGAGGTCGAGCGCATTGCTGGCGAACTGCCAAGCGGCATTGGCTTCTCCTGGACCGGCATGTCCTACGAGGAAAAACTCTC CGGCTCGCAAATGCCGGCGCTGTTCGCCCTCTCGGTACTGTTCGTGTTCCTGTGTCTGGCCGCCCTGTACGAAAGCTGGTCGATCCCGATCGCCGTAGTG CTGGTAGTACCGCTGGGTATCATCGGTGCCCTGATCGCCACCAGCCTGCGCGGCTTGTCCAACGACGTGTACTTCCTGGTCGGCCTGTTGACCACCATCG GCCTGGCGGCGAAAAACGCCATTCTGATCGTCGAGTTCGCCAAGGAACTGCACGAGCAAGGCCGCAGCCTGTACGACGCGGCGATCGAAGCGTGCCGCAT GCGTCTGCGCCCGATCATCATGACCTCGCTGGCGTTCATCCTCGGCGTGGTACCGTTGACCATCGCCAGTGGCGCCGGTGCCGGCAGCCAGCACGCCATT GGTACCGGCGTGATCGGTGGCATGATCAGTGCGACCGTGCTGGCTATCTTCTGGGTACCGCTATTCTTCGTCGCAGTGTCGTCGCTGTTCGGCAGCAAAG AGCCGGAAAAAGACGTCACCCCTGAAACTCCACGTTATGAGGCTGGGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCAAGTCTTTGTTGTCCCTGGCGGTAACCGCTTTCATTCTTGGCGGCTGCTCGCTGATTCCCGACTACCAGACCCCGGAATCGCCGGTGGCAGCGCAGTG GCCGCAAGGCCCTGCGTACTCGCCGACCCAGTCGGCAGACGTTGCCGCCGCCGAACAGGGCTGGCGCCAGTTCTTCCACGACCCGGCACTGCAGCAGCTG ATCCAGACCTCGCTGGTCAACAACCGCGACTTGCGCGTCGCCGCGTTGAACATCGACGCCTACCGCGCGCAATACCGCATCCAGCGTGCCGACCTGTTCC CGGCGGTTTCGGCCACCGGCAGCGGCAGCCGCCAGCGCGTGCCGGCAAACATGTCGCAGACCGGTGAATCGGGCATCACCAGCCAGTACTCGGCCACCTT GGGCGTCAGTGCCTATGAGCTGGACCTGTTCGGCCGTGTGCGCAGCCTCACCGAGCAGGCGTTGGAAACCTACCTGTCCAGCGAGCAGGCGCGCCGCTCC
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| Amino Acid Sequence |
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNA DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNKFQLTP VDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRLQTAEQFEKILLKVNSDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANAL DTAKALRQTIADLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVL AIGLLVDDAIVVVENVERVMSEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGLSVLVALIFTPALCATMLKPL KKGEHHVAKRGFFGWFNRNFDRSVTGYERSVGTILRNKVPFLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLK EEADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENSVFALAQRAQQHFFTFRDAMVFAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQ FLAKAAQSKILSAVRPNGLNDEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPNARMSPEDLQKWYVRNGAGEMVPFS SFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMAEVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVV LVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSLYDAAIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAI GTGVIGGMISATVLAIFWVPLFFVAVSSLFGSKEPEKDVTPETPRYEAGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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