Pseudomonas sp. LAIL14HWK12:I5, F629_RS0105250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCAGTTCTGGTTGTAGGCAGAGGCACCGATTTCCACGGCCTTGTCGTGCTCCGGCGACGTACGGTACGGGTTGACCGCCGCCCAGCCGTCGCCGTCC AGGCTTACGCCAGCGTCCTTGATCGGGGTCAGGCCCTTGGTCTCTACCGCCTGGGGCACCACGTTGCCATGAGCCCAGGCCGTACCGCTCAGCACAGCCG CAGCCAGCAGCCCCGTAGCCAGCAACACATTGCGTTTTGTTGTCATTGTTATGCCCTCACCATTGCACGCAAAGCCTCAACCACAGAGGCCGTGCCGCCA TCTTAAAAACAGCCCGCAGGCGGCCAAATGCTGCTTTGGTGGCCGGGCCTTACTCCCTTGGTAGTAGGGCTTGTGGTGAAGGGCCAATTGAGGTGCCGCT CGGGAACTCTTCCCGGCAAAGGCGGGATATTTTCCGTATCCGCCCAAGGCTGCCTCGCCGCACCCTGTGCAGGCCAAAACCTCCACAGGGAACTGCAACC
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| DNA Sequence for Gene |
>F629_RS0105250
ATGACAACAAGAACGCTACCCGCCCTCTCCCCTCTGGCCCTCAGCGTGCGGGCCCTGCTGCTGGCCGGTAGCCTGGCCCTGAGCAACGCGGCCATCGCGG CCACTCCCCCAGCGGCACCTGCCGGCAAGAACGTGACCTGGGAAGACATCGCCAACGACCACCTGACCACCAAGGACGTACTGCAATATGGCATGGGCAC CAATGCCCAACGCTGGAGCCCGTTGGCCCAGGTCAACGACAAGAACGTATTCAAGCTCACCCCGGCCTGGTCCTATTCCTTCGGTGACGAGAAGCAGCGC GGCCAGGAATCCCAGGCCATCGTCAGTGACGGCGTGGTCTACGTCACCGGCTCTTACTCGCGGGTATTCGCCCTGGATGCCAAGACCGGCAAACGCCTGT GGACCTACAACCACCGCCTGCCCGACAACATTCGCCCGTGCTGCGACGTGGTCAACCGCGGGGCGGCGATCTACGGCGACAAGATCTACTTCGGCACCCT GGACGCGCGGGTCATCGCCCTGGACAAGCACACCGGCAAGGTGGTGTGGAACAAGAAGTTCGGCGACCACAGCGCCGGCTACACCATGACCGGCGCCCCG GTGCTGATCAAGGACAAGACCAGCGGCAAGGTGCTGCTGATCCATGGCAGCTCCGGCGATGAGTTCGGCGTGGTTGGCCAGCTGTTCGCCCGCGACCCGG AAACGGGTGAAGAAGTGTGGATGCGGCCCTTCGTCGAAGGCCACATGGGCCGCCTGAACGGCAAGGACAGTACCCCGACCGGCGATGTGAAGGCGCCGTC CTGGCCAGATGACCCAACCACCGAAACCGGCAAGGTCGAAGCCTGGAGCCACGGCGGCGGCGCCCCTTGGCAAAGTGCAAGCTTCGATGCCGAGACCAAC ACCATCATCGTCGGCGCTGGTAACCCCGGCCCCTGGAACACTTGGGCACGCACCTCCAAGGATGGCAACCCCCACGACTACGACAGCCTCTATACCTCGG GCCAGGTCGGCGTCGACCCGAGCACCGGCGAGGTGAAGTGGTTCTACCAGCACACGCCGAACGATGCCTGGGACTTCTCTGGCAACAACGAGCTGGTGCT GTTCGACTACAAGGACAAAGACGGCAAGGTGGTCAAGGCCACCGCCCACGCCGACCGCAACGGCTTCTTCTACGTGGTCGACCGCAACAACGGCAAGCTG CAGAATGCCTTCCCGTTCGTGGACAACATCACCTGGGCCAGCCACATCGACCTGAAAACCGGTCGCCCGGTAGAAAACCCTGGCCAGCGCCCGGCCAAGC CGCTGCCGGGTGAAACCAAGGGAAAACCGGTGGAAGTGTCACCGCCGTTCCTCGGTGGCAAGAACTGGAACCCCATGGCCTACAGCCAGGACACCGGCCT GTTCTACATCCCCGGCAACCAGTGGAAGGAGGAGTACTGGACCGAGGAAGTGAACTACAAGAAAGGCTCGGCGTACCTGGGCATGGGCTTCCGCATCAAG CGCATGTACGACGACCACGTCGGTACCCTGCGGGCCATGGACCCGACCACCGGCAAGCTGGTGTGGGAACACAAGGAGCACCTGCCGCTATGGGCCGGCG TACTGGCCACCAAAGGCAACCTGGTGTTCACCGGCACCGGTGACGGCTTCTTCAAGGCCTTTGACGCCAAGACGGGCAAAGAGCTGTGGAAGTTCCAGAC CGGCAGCGGCATCGTTTCGCCGCCCATCACCTGGGAGCAGGACGGCGAACAGTTCATCGGCGTGACCGTGGGCTACGGCGGCGCCGTGCCGTTATGGGGC GGAGACATGGCTGAGCTGACCAAGCCGGTGGCCCAGGGTGGTTCGTTCTGGGTGTTCAAGATCCCGAGTTGGGACAACAAGACCGCGCAGCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCAGCGGGGAGCGGGCCAACCCCCTCCCCGCTTTTGTTCATCTTCCGCCAGGAGCCTTTCACCATGAACTACCTGCCATTTGCCTTGCTGTTGGTAC TGTCACCCGCCATGGCGGTGGGTGCCGACGACGATGGCAACGATGCCCCCCTGACCGTCAACGGTTGCGTGATTGCCGAAGCCAGCCAGTGCCCGGGGGC CAACCTTCGCGGCGCCAACCTGGCCAACCAGGACCTGCGCAAGATGAACCTGGCCGGCGCCGACCTGCGTGAGGCCGACCTGCGCCATGCCCGGCTGGAC CTGGCCAACCTGGAAAAGGCCCGCCTGCAAGGCGCCAACCTGACCCGCGCCAGCCTGCAGCAAAGCAACCTGCGCCTGGCTGACCTGAGTAATAGCAAGT TGGTCGCCATTCAAGGCTGGGGCATGTTCGCCCAAGGCGCGCAGTTCGAGAAAGCCGACCTCGGCGCGGCCTACTTGCAGTTCGCCCGGCTGTCAGGGGC
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| Amino Acid Sequence |
>quinonprotein alcohol dehydrogenase
MTTRTLPALSPLALSVRALLLAGSLALSNAAIAATPPAAPAGKNVTWEDIANDHLTTKDVLQYGMGTNAQRWSPLAQVNDKNVFKLTPAWSYSFGDEKQR GQESQAIVSDGVVYVTGSYSRVFALDAKTGKRLWTYNHRLPDNIRPCCDVVNRGAAIYGDKIYFGTLDARVIALDKHTGKVVWNKKFGDHSAGYTMTGAP VLIKDKTSGKVLLIHGSSGDEFGVVGQLFARDPETGEEVWMRPFVEGHMGRLNGKDSTPTGDVKAPSWPDDPTTETGKVEAWSHGGGAPWQSASFDAETN TIIVGAGNPGPWNTWARTSKDGNPHDYDSLYTSGQVGVDPSTGEVKWFYQHTPNDAWDFSGNNELVLFDYKDKDGKVVKATAHADRNGFFYVVDRNNGKL QNAFPFVDNITWASHIDLKTGRPVENPGQRPAKPLPGETKGKPVEVSPPFLGGKNWNPMAYSQDTGLFYIPGNQWKEEYWTEEVNYKKGSAYLGMGFRIK RMYDDHVGTLRAMDPTTGKLVWEHKEHLPLWAGVLATKGNLVFTGTGDGFFKAFDAKTGKELWKFQTGSGIVSPPITWEQDGEQFIGVTVGYGGAVPLWG GDMAELTKPVAQGGSFWVFKIPSWDNKTAQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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