Pseudomonas sp. LAIL14HWK12:I5, F629_RS0103245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I5 F629DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTCCTTCCCGCGCCCAGTCAGTGTTGACGTGCGCAGTATCTGGTTCTTTTTTAAGGGCTCGGCGGCTCAATGCTGTTGTGTTGGCGCCTCAGCCTCATT ACTCGAAAGCCGGCCCCACCGCTCCGGGAGGGCCTGTTAACCGTGCGATACAGGTGTAACGCACGTGCATCGACCCCAGCTTGCACAGGGCCCGAATACT TCAGACTAAAGTCGCAGGGCAAAAGCTTGTCAATATCCCGTCAAAAAAATCGTTCGATGATGATAATGCGATGCAAATAGCTGTTTTTCTGGCACTTATA AAAAGTTCAAAGTATTAATAGAGCAAAATGATATTACCGAATGTTTCGTTGCAACCTACGCTCGTGCATGTGGGAGCAACGCAGCGTTTTGGACTATTCG CCATAAGAGCGACCCGCCTGCGAGCCGACCAAGAAGCCACAACTACCGTTGTACGGGGCGCCGCAAGGGCTTCCCGACTTGTAACGAAGGGAGGCCCCCG
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| DNA Sequence for Gene |
>F629_RS0103245
ATGCCTAAGCCACCACGCACCCGCTCCGAGCTGGCCGACGTGCTCTTTCGCTTGCGCCGCAGCTTCTATGCCCTGGCCGCCTTTAGCGGCGTGATAAACG TCATGATGTTGACGCCAGCTATTTATATGCTGCAGGTGTATGACCGCGCGCTGGTCAGCCGCAACGTCACCACGCTGGGCATGCTCACGCTGCTGGTGGT CGGGTTGTTCCTGTTGATGTCGGCATTGGAGATGACCCGTACCCGCGTGCTGATCCGGGTGGGCAACTGCCTGGACATGGACCTCAACCGGCGCATCTTC AGCGCCGCATTCGAACGCAACCTGAGCCGCGCCGGCGGCAACCCGGCCCAGGCCCTGCAGGACCTGGCGCAAGTGCGGCAGTTTCTGACCGGCAACGGTT TGTTCGCCTTTTTCGATGCACCATGGACGCCGATCTACCTGGTGGTCTGCTACCTGATCCACCCTTGGCTCGGGCTGGTCACGATGATTGGCTCGCTGAT CCTGGTGGGCCTGGCCTACCTCACCGAGAAGGCTACGCAAAAGCCACTGGCCGAAGCCAATCAGGCCGCCATGACGTCGGCCAGCTACGCCAACAACAAC CTGCGCAACGCCGAAGTGATCGAGGCCATGGGCATGCTGCCGTCAATCGGCAAGCGCTGGTACCAAGGGCACTTGCGCATCCTGCAGATGCAGACCCTGG CCTCCGACCGCGCGGCGCTGATCAGCAGCACCGGGCGTTTCGTGCGCATCACCTTGCAGTCGCTGATCCTCGGTACCGGTGCGTTGCTGGCAATAGAAGG CAAGATCACCCCCGGCATGATGATCGCGTGTTCGATCCTGACCGGCCGCGCCCTGGGCCCGGTGGAACAGGTGATTGCCTCCTGGAAGCAGTTGCTCGGT TGCCGCTTGGCCTGGGGCCGGCTCAACGACCTGCTGCAAGACTATCCGCAGCGGCCACCGAGCATGTCGCTGCAGCGGCCGATGGGCATGCTGGCCGTGG AAAACGTGATCGCCGGTGCCCCCGGCACCACCACCAGCATCGTGCGCGGGGTCAGCTTCAGCCTGGTGCCGGGTGAAAGCTTAGGCATCATCGGCCCTTC GGCTTCGGGCAAGTCTACCCTCGCCCGCCTGCTGGTGGGTGTGTGGCCGGCACAGGCCGGCAAGGTGCGCCTGGATGGTGCCGACATCTTCACCTGGAAC AAGGCCGAACTCGGCCCTTGGCTGGGCTACCTGCCGCAAGACGTGGAGCTGTTCGAGGGCACCATCGCCGAAAACATCGCGCGCTTTGCCGAGGTGGACA GCGATGCGGTGATCCGTGCTGCCCGCAGCAGCGGCGTACACGACATGATCCTGCACTTCCCGCAGGGCTACGACACGCGCCTGGCCGCCGACGGCACCCC ACTGTCCGGCGGCCAGAAGCAGCGTATCGCCCTGGCCCGCGCCCTGTATGGCGAGCCCAACCTGGTCGTGCTGGACGAACCCAACGCCAACCTCGATGAC GTCGGCGAGAAGGCCCTGGTGGATGCGCTGGCCGAGTTGAAGGCGCGCGGCGCCACGGTGATCCTGATTTCCCATCGGCCCAATGTGCTGTGTGCAGTCG ACAAGATACTCATGTTGCGCGACGGCGCTGTGCAAATGCTCGGCAGCCGCGACGAAGTATTCGCGGCGCTGCGCAAGGCTGCCGTGATTCCAGCGGCCGG TGCGGCACCGCTGGCTTCGGTCAAAGTAAGGGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATCATGCAGATGACTCAACACGCTGAGTTGATCCCCGCCGAAGCCAAGAACCTGATCGACCTGGATGCGGCCCGGCCAGTACGCTGGGGCGTATGGA TGGTGATTGCCGGTTTTGGCGGTTTCTTGCTGTGGTCTTGCCTGGCGCCACTGGACGCAGGCGTGGTAGCCACCGGCACGGTCAAGGTCACCAGCAACCG CAAGGCGGTACAGCACCTGACCGGCGGCACGGTCGAGGCGATCCTGGTGCGCGAAGGCGATCTGGTAAAAAAAGGCCAGGAAGTGGTGCGGCTCGACGCC CTGCGCGCAGTCGCTGAGCAAGGCGCGCTCAGCGCGCAGTACATCGTCAGCAAAACCGTGGAAAACCGCCTGGAAGCCGAACGCGACGGCCGCGACACGG TCACCTTCGATCCTGCCCTGCTCCAGCATTACGCCAATGACCCTCGCTTGCTGGCCGCCATGGACTTGCAACAGCGCCTGCTCGACACCCGCCGCGCCGG
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| Amino Acid Sequence |
>peptidase
MPKPPRTRSELADVLFRLRRSFYALAAFSGVINVMMLTPAIYMLQVYDRALVSRNVTTLGMLTLLVVGLFLLMSALEMTRTRVLIRVGNCLDMDLNRRIF SAAFERNLSRAGGNPAQALQDLAQVRQFLTGNGLFAFFDAPWTPIYLVVCYLIHPWLGLVTMIGSLILVGLAYLTEKATQKPLAEANQAAMTSASYANNN LRNAEVIEAMGMLPSIGKRWYQGHLRILQMQTLASDRAALISSTGRFVRITLQSLILGTGALLAIEGKITPGMMIACSILTGRALGPVEQVIASWKQLLG CRLAWGRLNDLLQDYPQRPPSMSLQRPMGMLAVENVIAGAPGTTTSIVRGVSFSLVPGESLGIIGPSASGKSTLARLLVGVWPAQAGKVRLDGADIFTWN KAELGPWLGYLPQDVELFEGTIAENIARFAEVDSDAVIRAARSSGVHDMILHFPQGYDTRLAADGTPLSGGQKQRIALARALYGEPNLVVLDEPNANLDD VGEKALVDALAELKARGATVILISHRPNVLCAVDKILMLRDGAVQMLGSRDEVFAALRKAAVIPAAGAAPLASVKVRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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