Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_5.6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACTGGACGAGCGTGCCCGCGCCAAGCTGGAGCTCATCCTCGACTACATGCGCGCCGATCCCAGCGTCAACCGCATCGAACTGGACGGGCATTCCGACAAC AGCGGCAGTCGCCTGCTCAATCGCGAGCTGTCGCGCCGCCGCGCGCTGGCGGTGCAGGCCTACTTCGAGTCCAGGGGCTTCCCGGCGGAGCACATCCAGG TGCGCTTCCACGGCGAGCAGTACCCGCTGGTGAACAACAGCTCGGCGGCCAACCGGGCGAAGAACCGCCGGGTCACCGTGCAGCTGCTGCGCGTCCCGGA GAGCGAGGCGAACGAATCGGAGGCTGCCGGCAGACCGGAGGCCGCGGCGGACAAGACGGCCGCTCCGGCTTCCTGAGACCAGGTCGCGGTGCTGCAAGAA AGTGTCGCCTCGTCGTCACAAGCTGTCGCGCCCCTGTAAATAAGCTGTCCGCCCCGCTAGAATCAACGGTTTTCGTGATACCCCTCCTGGAGCTGATGGC
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DNA Sequence for Gene |
>M905_RS0117510
ATGTCGGACATTAAGAAGGTAGTTCTGGCCTATTCCGGTGGCCTGGACACCTCGGTCATTCTCAAGTGGCTGCAAGAAACCTATCAATGCGAGGTGGTGA CCTTCACCGCTGACCTGGGCCAGGGCGAGGAGGTCGAGCCGGCCCGCGCCAAGGCGCAGGCCATGGGCGTCAAGGAAATCTACATCGACGACCTGCGCGA GGAGTTCGTTCGCGACTTCGTGTTCCCGATGTTCCGCGCCAACACTATCTACGAAGGCGAATACCTGCTGGGCACCTCCATCGCCCGTCCGCTGATCGCC AAGCGTCTGATCGAGATCGCCAACGAGACTGGCGCCGACGCCATCTCCCACGGCGCCACCGGCAAGGGCAACGACCAGGTGCGTTTCGAGCTGGGCGCCT ATGCGCTGAAGCCCGGCGTCAAGGTGATCGCCCCCTGGCGCGAATGGGACCTGACCTCCCGCGAGACCCTGATGGCCTATGCCAAGAAGGCCAACATCCC GGTCGACTTCACCAAGGCTGGCAAGAAGTCCCCGTACTCCATGGACGCCAACCTGCTGCACATCTCCTACGAGGGCGGCGTGCTGGAGGACACCTGGACC GAGCACGAGGAAGACATGTGGCGCTGGACCGTCTCCCCGGAGAAGGCTCCCGACGTGCCCACCTACATCGAGCTGACCTACCGCCAGGGCGACATCGTCG CCATCGACGGCGTCGAGCTGACCCCGGCCCAGGTGCTGACCAAGCTCAACGAGATCGGCGGCGCCAACGGCATCGGTCGTCTGGACATCGTCGAGAACCG CTACGTCGGCATGAAGTCCCGCGGCTGCTACGAAACCCCCGGCGGCACCATCATGCTCAAGGCTCATCGCGCCATCGAGTCCATCACCCTGGACCGCGAA GTGGCCCACCTGAAGGACGAGCTGATGCCGCGCTACGCCAGCCTGATCTACAACGGCTACTGGTGGAGTCCGGAGCGCAAGATGCTGCAGACCATGATCG ACGCCTCCCAGGAAAACGTGAACGGCGTGGTGCGCCTGAAGCTCTACAAGGGCAACGTCATCGTGGTCGGCCGCAAGTCCGACGACAGCCTGTTCGACAG CCGCATCTCCACCTTCGAGGACGATGCCGGCGCCTACAACCAGGCCGATGCCGCCGGCTTCATCAAGCTCAACGCCCTGCGCATGCGCATCGCCGCCAAC AAGGGTCGCAAGCTGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAAGCTTGCCAGCCTGAGCCAGACGAACCCCGGCCGCGTGCCGGGGTTCGTGTTTTGAAGCCCGGAATAGGGCCTGAGAGAGGAGTACCAACCCCATGAG ACTGCTGCACACCATGCTGCGTGTCGGAGACCTGGAAAAATCCATCGCCTTCTACACCGAAGTGCTCGGGATGACGCTGCTGCGTCGCAAGGACTACCCG GAAGGCCAGTTCACCCTGGCATTCGTCGGCTACGGCGACGAAGCGCACAACAGCGTGATCGAGCTGACCTACAACTGGGGCGTCGACAAATACGACCTGG GCAACGGTTACGGCCACATCGCTCTGGAAGTGGAGGACGTCTACAAGGCCTGCGAGGATATCCGTGCCCGTGGTGGCAAGATCACCCGCGAGCCCGGCCC GATGAAGCACGGCTCGAGCATCCTCGCCTTCGTCGAGGACCCGGACGGCTACAAGATCGAGCTGCTCTCCCCCGAGCGCAAGGACTGATGCCGGCGCGCC
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Amino Acid Sequence |
>argininosuccinate synthase
MSDIKKVVLAYSGGLDTSVILKWLQETYQCEVVTFTADLGQGEEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIA KRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLTSRETLMAYAKKANIPVDFTKAGKKSPYSMDANLLHISYEGGVLEDTWT EHEEDMWRWTVSPEKAPDVPTYIELTYRQGDIVAIDGVELTPAQVLTKLNEIGGANGIGRLDIVENRYVGMKSRGCYETPGGTIMLKAHRAIESITLDRE VAHLKDELMPRYASLIYNGYWWSPERKMLQTMIDASQENVNGVVRLKLYKGNVIVVGRKSDDSLFDSRISTFEDDAGAYNQADAAGFIKLNALRMRIAAN KGRKLI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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