Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_30.31_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCTTGCAGGCCATCGTGGAAATGTTCCCGGTGCTCTCCCGGGTGCGCATGAACCGCCAGTGGGGCGGCATCGTGGATACCACCCCGGACGCCTGCCCGA TCATCTCCAAGACTCCGGTGAAGAACCTGTACTTCAACTGCGGCTGGGGTACCGGCGGCTTCAAGGCCACCCCCGGCTCGGGCCATGTGTTCGCCGCCAG CCTGGCGCGCGGCGAGATGCACCCGCTGGCTCAGCCGTTCTCCATCGAGCGCTTCTACACCGGCGCGCTGATCGACGAGCACGGCGCCGCGGCGGTGGCG CACTGAGGACGCGCGAAGGAAGGCGTCGAGTGAGCCTCGCGCGCACGTGGAGGAAACCGGCCCGCCGGGCCGGGTGAGGCTGTTGGCGGCGAGCACCGCG GCCTTCACCTGAAGCCCCTCTTCCAGGAGGGGCGCAACGAACCAATTGCCAACCCCTGTCCCGAGCGGGAGAGGGGACGAAGTACCAGGAGGCCCCAACC
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DNA Sequence for Gene |
>M905_RS0114630
ATGCTGCACATCTTCTGTCCCCATTGCGGAGAACAGCGCTCCGAAGAGGAATTCCATGCCAAGGGCCAGGCGCACATCGCCCGTCCGCTGGATCCGGATG CCTGCACCGACGAGGAGTGGGGCGAATACATGTTCTTCCGCGACAACCCGCGCGGCCTGCACCACGAGCTGTGGGTGCATTCGGCGGGCTGCCGCAAGTA CTTCAACGTCACCCGCCACACGGTGACCTACGAGATTCTGGAAACCTACAAGATCGGCGAGCGTCCCGGCGTATCCGAGAAGAAGGCCGTCGAACAAGGA GTACCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCAGGTCAATCGTCTCCCCGGCGGCGGCCGCATCGACCGCAGCCAGCCCCTGACCTTCACCTTCAACGGCCAGACCTACCAAGGCTACGCCGGCGACAC CCTGGCCGCCGCGCTGCTGGCCAACGGCGTCGACGTGGTCGGCCGCAGCTTCAAGTACTCGCGGCCGCGCGGCATCGTCGCCGCCGGTGCCGAGGAGCCC AATGCCGTGCTGCAGCTGGGTTCCTGCGAGGCCGCCCAGGTGCCCAACGTGCGGGCCACCCAGCAGGCGCTGTTCAACGGCCTGGTGGCGCGCAGCACCA ACGGCTGGCCGAGCGTCGATACCGACCTCATGGCGCTGGTCGGCAAGGTCGGCGGCAAGCTGATGCCGCCGGGCTTCTACTACAAGACCTTCATGTACCC GCAGAGCCTCTGGCTGACCTACGAGAAGTACATCCGCAAGGCCGCGGGCCTGGGCCGGGCGCCCACCGAGAGGGACCCGGACATCTACGACCATGTCAAC
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Amino Acid Sequence |
>sarcosine oxidase subunit delta
MLHIFCPHCGEQRSEEEFHAKGQAHIARPLDPDACTDEEWGEYMFFRDNPRGLHHELWVHSAGCRKYFNVTRHTVTYEILETYKIGERPGVSEKKAVEQG VPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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