Pseudomonas thermotolerans J53, M905_RS0113320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_24.25_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCTTCCACCCTGCACCACCGCTTCAAGGCGGTCACCGCACTCAGCCCGCTGCAGTATCAGAAGCAGCTGCGCCTGCAGGAGGCCCGCCGGCTGATGGT CACCGAAGGCCTGGAGGCTGCGGCGGCCAGCTACCGGGTCGGTTACGAGAGTCCCTCGCAGTTCAGCCGCGAATACAGCCGGCTGTTCGGCGCCCCGCCG CTGCGCGACCTGGGCCGCCTGCGGCCCAGCGTGCGGAACATCCTGACCAGGTAGCGCGGTAGCGCGCGGCGCCGGCATTCGGAAATCCGAACGCGCCAGG CTGGAATATTCGGCAGACCGGACGCAGCCGTCCCGAAGCTCATCGCAAAATCCTAAAAAATCCCTTTAATTTCAATCACTTGATCAAAAAGAAAGGGGCT GGCACGCAACCTGCTCTTCTCCTGGCCGAATGCCCTCGGCGCGTGGCGGCCTGCCGCGCCCGGGGCAGACCACGAAAACAACAAGCCGAGGACAAGATCC
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| DNA Sequence for Gene |
>M905_RS0113320
ATGCGCATCGCTCCCCAGTTCCTGGCCGCCGCCGTGGCCGCCGCCCTGCTGTCCAGCAGCGCCATCGCCGAGGAACTCACCGGCACCCTGAAGAAGATCA AGGAAACCGGCACCATCACCCTGGGCCACCGCGACGCTTCCATCCCCTTCTCCTATCTCGGCGCCGAGCCGGGCAAGCCGGTCGGCTACGCCCACGACCT GCAGCTGAAGGTGGTCGAGGCCATCAAGACCGAGCTGGGCCTGCCGGAGCTGAAGGTCCGCTACAACCTGGTCACCTCGCAGACCCGCATCCCGCTGGTG CAGAACGGCACCGTGGACCTGGAGTGCGGCTCCACCACCAACAACCTGGAGCGCCAGCGCCAGGTGGACTTCTCGGTGGGCATCTTCGAGGTCGGCACCC GCCTGCTGACCCGCAAGACCTCCGGCATCCGGGACTTCGCCGACCTCAAGGGCAAGAACGTGGTGACCACCGCCGGCACCACCTCCGAGCGTCTGCTCAA GGCGATGAATGCCGAGAAGCGAATGGGCATGAACATCATCTCCGCCAAGGACCACGGCGAATCCTTCCTGATGCTGGAGTCCAACCGCGCGGTGGCCTTC ATGATGGACGACGCCCTGCTCTACGGGGAAATGGCCAAGGCCAAGAACCCGGACGACTGGGTGGTGGTCGGCGAGCCGCAGTCCTATGAGATCTACGGCT GCATGCTGCGCAAGGGCGACCCGGCCTTCAAGCAGCTGGTGGACAAGGCCCTGAGCGCCACCTTCGCCTCCGGGGAAATCAACGAGATCTACGCCCGCTG GTTCCAGAACCCCATCCCGCCGAAGGGGCTGAACCTCAAGTTCCCGATGAGCGACGAGCTGAAGAAGCTGATCGCCAACCCAACCGACAAGTCCGCGGAA GAGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGAGAATCGGCCAGGGCACCCTCTCCCGCTGGCGGGAGAGGGTCGGGATGAGGGTGGGGATCACGCCCCCTCATCCTTGGCCTCGCTCCCTCGGGAGA AGGGTTGCCCGGACCGACCTCGTGCAATCTCCGAATCGACCGCTCTCCTTCCGAACCAAGCAAGAGAACTCCCTGATGAACTACAACTGGGACTGGGGCG TATTCTTCAGGTCTACCGGGATCGGTGAGGAAACCTACCTGGACTGGTTCGTCGCCGGCCTGGGCTGGACCATCGCCGTCGCCCTGGCGGGCTGGATCAT CGCCCTGCTGCTGGGCACGCTGCTCGGCATTCTGCGCACCGTGCCGAACCGCTGGCTTGCCGGCATCGCCACCTGCTACGTGGAAATCTTCCGCAACGTG CCGCTTCTGGTGCAGCTGTTCCTCTGGTACTTCCTGGTGCCCGACCTGCTGCCCGAGTCGCTGGAGCTCTGGTTCAAGCAGGACCTGTCGCCGGCCACCT
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| Amino Acid Sequence |
>ABC transporter
MRIAPQFLAAAVAAALLSSSAIAEELTGTLKKIKETGTITLGHRDASIPFSYLGAEPGKPVGYAHDLQLKVVEAIKTELGLPELKVRYNLVTSQTRIPLV QNGTVDLECGSTTNNLERQRQVDFSVGIFEVGTRLLTRKTSGIRDFADLKGKNVVTTAGTTSERLLKAMNAEKRMGMNIISAKDHGESFLMLESNRAVAF MMDDALLYGEMAKAKNPDDWVVVGEPQSYEIYGCMLRKGDPAFKQLVDKALSATFASGEINEIYARWFQNPIPPKGLNLKFPMSDELKKLIANPTDKSAE EI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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