Pseudomonas thermotolerans J53, M905_RS0112870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_23.24_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GNTCCTGCACCGAGGTGCGCCCCCAGGCATCGGCCGCGGCGTGGGCGGCGTCCAGGGCGCGCTCGATGTCGGCGGCGTCGGAACGGGGGAACTCGGCGAT CACTTCGCCGTTCACCGGCGAGGTGTTGGTGAAGTACTGGCCATTCACCGGCGGGACGAACTCACCGCCGATGTAGTTACCGTAGCGAGACTTGAAGGAA ACGATGGCGCCAGGGGTGCCGGGATGCGCGTAGATCATGGAAGCCTCTCTCGTGCTGGATGCGCCTGCAGGCGAGGGGAAGAAGGGGGTATCCCTTAAGG CTTAGCAGAAGATGCACTGCCTGACGGGAGCGCCGATGGGTGGCCGCCCGATCTTTTCCGCCGTGCCGCGGTCGAACGGGGATTCGCAAGCGGCGCACGT CCTGGATTGGGGGCAACAGGCCGAGGCCCGGAAGCCCCGGTCGCTGTGCTAACCTGCGGCAAGATTTTCCGGGCGCCGACGCCCGCTCCAGAGGCCATTC
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| DNA Sequence for Gene |
>M905_RS0112870
ATGCACATCCACATTCTCGGTATTTGCGGCACCTTCATGGGCTCGTTGGCGGTACTCGCCAAGGAGCTCGGCCATCGCGTCACCGGCTCTGACGCCAACG TTTATCCGCCCATGAGCACCCAGCTGGAGGCCCAGGGCATCGAGTTGCTGCAGGGCTACCTGCCCGAACACCTGAATCCGGCGCCGGACCTGGTGGTGAT CGGCAACGCCCTGTCGCGTGGCAACCCGGCAGTGGAGTACGTGCTGAACAAAGGGCTGCCCTACGTCAGCGGTCCGCAGTGGCTGGCCGACCATGTGCTG CAGGGCCGCTGGGTGCTGGCGGTGGCCGGCACCCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAGCATGCCGGGATGAGCCCGGGCT TCCTGATCGGCGGAGTGCCGCGCAATTTCGCGGTGTCGGCGCGCCTCGGCGGTACCCCCTTCTTCGTGGTGGAGGCCGACGAGTACGACAGCGCCTTCTT CGACAAGCGCTCCAAGTTCGTCCACTACCGGCCACGGACCGCGATCCTCAATAACCTGGAATACGATCACGCGGACATCTTCCCTGACCTGGCGGCCATC GAGCGGCAGTTCCACCATCTGGTGCGGACCATTCCCGGCGAGGGGCTGATCATCCATCCGCAGGGCGAAGAAGCCCTGCAGCGGGTCATCGCCATGGGCT GCTGGACCCCGGTGCAGACCACCGGCGAAGGCGGCCAGTGGCAAGCGCGACTGCTCAGCGAAGACGGTTCGCGCTTCGAGGTACTCCATGAGGGGACCGT GCAGGGCGTGGTGGACTGGGAACTGAGCGGCCGCCACAACGTCAGTAACGCCCTGGCCTGCCTGGCCGCCGCCCGTCACGTCGGCGTGGTGCCGGAGCTG GGCATCGCCGGGCTGTGCAGTTTCAAGAGCGTCAAGCGGCGCATGGAGAAGGTCGCCGAGGTGCGCGGCATCACCCTCTACGACGACTTCGCCCACCATC CCACCGCCATCGCCACCACCCTGGACGGTCTGCGCAAGCGGGTCGGCGACGCTCCGGTGATCGCGGTGATCGAGCCGCGCTCCAACTCCATGAAGCTCGG CGCCCACCGCGAGGGGCTGGCAGATTCCGTGGCCCAGGCCGACCGGGTGTTCTGGTACGCGCCACCGAACCTCGGCTGGGACCTGGCCGCCACCGTGGCC GGCTCCGGGGGGCCCACCCAGGTGTGCGACTCCCTGGAGGCGATCATCTCCGGGGTCAAGGCCCAGGCCACTCCGGGCAGCCATGTGGTGATCATGAGCA ACGGCGGTTTCGGCGGCCTGCACGGCAAGCTGGCTGCGGCGCTGGAGGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCTACTCCTTCTCCCCAGCGGGGAGAGGGGAGGCCCTTTCCGGAGAAGGGGCATCTGGATTGACGAGGAGACTTCATGAGCGGTCCCGAACGCATCACT CTGGCGATGACCGGCGCTTCCGGCGCCCAGTACGGCCTGCGCCTGCTCGACTGCCTGATCCAGGAAGATCGCGAGGTGCACTTCCTGATCTCCAAGGCGG CGCAGCTGGTGGTCGCCACCGAGACCGACGTCAGCCTGCCGTCCAAGCCGCAGGCGATGCAGGCCTTCCTCAGCGAGTACACCGGCGCCGCCCCGGGACA GATCCGCGTCTACGGCAAGGAGGACTGGATGGCTCCGGTGGCCTCCGGCTCCGGCGCTCCCGGCGCCATGGTGGTCGTGCCCTGTTCCACCGGCACCCTG TCGGCGATTGCCACCGGCGCCTGCAACAACCTGATCGAGCGCGCCGCCGACGTGGCCCTCAAGGAGCGCCGCCAGCTGATCCTGGTGCCCCGGGAGTCGC
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| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLEAQGIELLQGYLPEHLNPAPDLVVIGNALSRGNPAVEYVLNKGLPYVSGPQWLADHVL QGRWVLAVAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPRNFAVSARLGGTPFFVVEADEYDSAFFDKRSKFVHYRPRTAILNNLEYDHADIFPDLAAI ERQFHHLVRTIPGEGLIIHPQGEEALQRVIAMGCWTPVQTTGEGGQWQARLLSEDGSRFEVLHEGTVQGVVDWELSGRHNVSNALACLAAARHVGVVPEL GIAGLCSFKSVKRRMEKVAEVRGITLYDDFAHHPTAIATTLDGLRKRVGDAPVIAVIEPRSNSMKLGAHREGLADSVAQADRVFWYAPPNLGWDLAATVA GSGGPTQVCDSLEAIISGVKAQATPGSHVVIMSNGGFGGLHGKLAAALEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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